Information for 9-AGATTAGTCAGKGASA (Motif 10)

C G T A A T C G G T C A A C G T A G C T C G T A T A C G C A G T A T G C G T C A A T C G C A G T A C T G C G T A A T G C G T C A
Reverse Opposite:
A C G T T A C G C G A T A G T C G T C A T A G C A C G T A T C G G C T A A T G C A C G T T C G A G T C A A C G T A T G C A C G T
p-value:1e-13
log p-value:-3.136e+01
Information Content per bp:1.732
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.5 +/- 17.3bp
Average Position of motif in Background84.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGATTAGTCAGKGASA
NNAATTAGTCACGGT--
 A C G T C G T A A T C G G T C A A C G T A G C T C G T A T A C G C A G T A T G C G T C A A T C G C A G T A C T G C G T A A T G C G T C A
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGATTAGTCAGKGASA
RGGATTAR---------
 A C G T C G T A A T C G G T C A A C G T A G C T C G T A T A C G C A G T A T G C G T C A A T C G C A G T A C T G C G T A A T G C G T C A
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGATTAGTCAGKGASA
-GATGAGTCAT-----
 C G T A A T C G G T C A A C G T A G C T C G T A T A C G C A G T A T G C G T C A A T C G C A G T A C T G C G T A A T G C G T C A
A C G T T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T A C G T A C G T A C G T A C G T A C G T

BATF::JUN/MA0462.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGATTAGTCAGKGASA
GAAATGACTCA------
 A C G T C G T A A T C G G T C A A C G T A G C T C G T A T A C G C A G T A T G C G T C A A T C G C A G T A C T G C G T A A T G C G T C A
C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGATTAGTCAGKGASA
AGATAAGA--------
 C G T A A T C G G T C A A C G T A G C T C G T A T A C G C A G T A T G C G T C A A T C G C A G T A C T G C G T A A T G C G T C A
C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGATTAGTCAGKGASA
-NATGASTCABNN---
 C G T A A T C G G T C A A C G T A G C T C G T A T A C G C A G T A T G C G T C A A T C G C A G T A C T G C G T A A T G C G T C A
A C G T C T A G T C G A C G A T A C T G C G T A T A C G A G C T T G A C G C T A A C G T G A T C T A G C A C G T A C G T A C G T

JUND/MA0491.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGATTAGTCAGKGASA
-NATGAGTCACN----
 C G T A A T C G G T C A A C G T A G C T C G T A T A C G C A G T A T G C G T C A A T C G C A G T A C T G C G T A A T G C G T C A
A C G T A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C A C G T A C G T A C G T A C G T

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGATTAGTCAGKGASA
-RATGASTCAT-----
 C G T A A T C G G T C A A C G T A G C T C G T A T A C G C A G T A T G C G T C A A T C G C A G T A C T G C G T A A T G C G T C A
A C G T C T A G T C G A G C A T C A T G G C T A T A G C C G A T G T A C C T G A A G C T A C G T A C G T A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGATTAGTCAGKGASA
GGATTAGC--------
 C G T A A T C G G T C A A C G T A G C T C G T A T A C G C A G T A T G C G T C A A T C G C A G T A C T G C G T A A T G C G T C A
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGATTAGTCAGKGASA
-DATGASTCATNN---
 C G T A A T C G G T C A A C G T A G C T C G T A T A C G C A G T A T G C G T C A A T C G C A G T A C T G C G T A A T G C G T C A
A C G T C A T G T C G A C G A T C A T G G C T A T A G C C G A T G T A C G C T A A G C T G A T C T G A C A C G T A C G T A C G T