Information for 9-MRTAGGARMTAAA (Motif 17)

G T C A T C G A A C G T C G T A A C T G C T A G C G T A C T G A G T A C A C G T C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T C G A T C G T A A C T G A G C T A C G T A G T C A G T C A C G T C G T A A G C T A C G T
p-value:1e-10
log p-value:-2.475e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.3 +/- 22.6bp
Average Position of motif in Background65.9 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--MRTAGGARMTAAA-
CTACTAGGATGTNNTN
 A C G T A C G T G T C A T C G A A C G T C G T A A C T G C T A G C G T A C T G A G T A C A C G T C G T A C G T A C G T A A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

PB0115.1_Ehf_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--MRTAGGARMTAAA-
AAGATCGGAANTNNNA
 A C G T A C G T G T C A T C G A A C G T C G T A A C T G C T A G C G T A C T G A G T A C A C G T C G T A C G T A C G T A A C G T
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

PB0012.1_Elf3_1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-MRTAGGARMTAAA
AACAAGGAAGTAA-
 A C G T G T C A T C G A A C G T C G T A A C T G C T A G C G T A C T G A G T A C A C G T C G T A C G T A C G T A
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:MRTAGGARMTAAA
NACAGGAAAT---
 G T C A T C G A A C G T C G T A A C T G C T A G C G T A C T G A G T A C A C G T C G T A C G T A C G T A
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:MRTAGGARMTAAA-----
--TAGGTAATAAAATTCA
 G T C A T C G A A C G T C G T A A C T G C T A G C G T A C T G A G T A C A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

PH0012.1_Cdx1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:MRTAGGARMTAAA----
-TAAGGTAATAAAATTA
 G T C A T C G A A C G T C G T A A C T G C T A G C G T A C T G A G T A C A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

PH0013.1_Cdx2/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:MRTAGGARMTAAA----
-AAAGGTAATAAAATTT
 G T C A T C G A A C G T C G T A A C T G C T A G C G T A C T G A G T A C A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

PB0148.1_Mtf1_2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-MRTAGGARMTAAA
AAATAAGAAAAAAC
 A C G T G T C A T C G A A C G T C G T A A C T G C T A G C G T A C T G A G T A C A C G T C G T A C G T A C G T A
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

CDX2/MA0465.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:MRTAGGARMTAAA-
---AAGCCATAAAA
 G T C A T C G A A C G T C G T A A C T G C T A G C G T A C T G A G T A C A C G T C G T A C G T A C G T A A C G T
A C G T A C G T A C G T T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:MRTAGGARMTAAA
AACAGGAAGT---
 G T C A T C G A A C G T C G T A A C T G C T A G C G T A C T G A G T A C A C G T C G T A C G T A C G T A
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T