Information for 8-CATGCATATGAAARSY (Motif 16)

A G T C G T C A A C G T A C T G G T A C G T C A C G A T G T C A C G A T C T A G G T C A G T C A G C T A C T A G T A G C G A C T
Reverse Opposite:
C T G A A T C G G A T C C G A T C A G T A C G T G A T C C G T A C A G T C G T A A C G T A C T G T G A C C G T A A C G T A C T G
p-value:1e-10
log p-value:-2.495e+01
Information Content per bp:1.666
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif97.5
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets42.2 +/- 16.6bp
Average Position of motif in Background47.5 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CATGCATATGAAARSY
ATATGCAAATNNN----
 A C G T A G T C G T C A A C G T A C T G G T A C G T C A C G A T G T C A C G A T C T A G G T C A G T C A G C T A C T A G T A G C G A C T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CATGCATATGAAARSY
YATGCATATRCATRT-
 A G T C G T C A A C G T A C T G G T A C G T C A C G A T G T C A C G A T C T A G G T C A G T C A G C T A C T A G T A G C G A C T
G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CATGCATATGAAARSY
-ATGMATATDC-----
 A G T C G T C A A C G T A C T G G T A C G T C A C G A T G T C A C G A T C T A G G T C A G T C A G C T A C T A G T A G C G A C T
A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CATGCATATGAAARSY
CTCATGAATATTCAT---
 A C G T A C G T A G T C G T C A A C G T A C T G G T A C G T C A C G A T G T C A C G A T C T A G G T C A G T C A G C T A C T A G T A G C G A C T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CATGCATATGAAARSY
WATGCAAATGAG----
 A G T C G T C A A C G T A C T G G T A C G T C A C G A T G T C A C G A T C T A G G T C A G T C A G C T A C T A G T A G C G A C T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CATGCATATGAAARSY
TTGTATGCAAATTAGA---
 A C G T A C G T A C G T A G T C G T C A A C G T A C T G G T A C G T C A C G A T G T C A C G A T C T A G G T C A G T C A G C T A C T A G T A G C G A C T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CATGCATATGAAARSY
TTGTATGCAAATTAGA---
 A C G T A C G T A C G T A G T C G T C A A C G T A C T G G T A C G T C A C G A T G T C A C G A T C T A G G T C A G T C A G C T A C T A G T A G C G A C T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CATGCATATGAAARSY
TTGTATGCAAATTAGA---
 A C G T A C G T A C G T A G T C G T C A A C G T A C T G G T A C G T C A C G A T G T C A C G A T C T A G G T C A G T C A G C T A C T A G T A G C G A C T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CATGCATATGAAARSY
TATGCWAATBAV----
 A G T C G T C A A C G T A C T G G T A C G T C A C G A T G T C A C G A T C T A G G T C A G T C A G C T A C T A G T A G C G A C T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CATGCATATGAAARSY
TTATGCAAAT-------
 A C G T A G T C G T C A A C G T A C T G G T A C G T C A C G A T G T C A C G A T C T A G G T C A G T C A G C T A C T A G T A G C G A C T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T