Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-70 | -1.626e+02 | 0.0000 | 259.0 | 34.91% | 2374.4 | 10.40% | motif file (matrix) |
svg |
2 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-57 | -1.321e+02 | 0.0000 | 85.0 | 11.46% | 243.8 | 1.07% | motif file (matrix) |
svg |
3 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-52 | -1.208e+02 | 0.0000 | 151.0 | 20.35% | 1052.9 | 4.61% | motif file (matrix) |
svg |
4 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-48 | -1.122e+02 | 0.0000 | 213.0 | 28.71% | 2173.3 | 9.52% | motif file (matrix) |
svg |
5 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-44 | -1.033e+02 | 0.0000 | 211.0 | 28.44% | 2263.2 | 9.91% | motif file (matrix) |
svg |
6 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-39 | -9.156e+01 | 0.0000 | 86.0 | 11.59% | 426.4 | 1.87% | motif file (matrix) |
svg |
7 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-34 | -8.039e+01 | 0.0000 | 140.0 | 18.87% | 1297.3 | 5.68% | motif file (matrix) |
svg |
8 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-33 | -7.675e+01 | 0.0000 | 123.0 | 16.58% | 1060.3 | 4.64% | motif file (matrix) |
svg |
9 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-30 | -7.111e+01 | 0.0000 | 109.0 | 14.69% | 901.5 | 3.95% | motif file (matrix) |
svg |
10 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-30 | -7.111e+01 | 0.0000 | 80.0 | 10.78% | 488.1 | 2.14% | motif file (matrix) |
svg |
11 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-30 | -7.058e+01 | 0.0000 | 113.0 | 15.23% | 970.7 | 4.25% | motif file (matrix) |
svg |
12 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-27 | -6.410e+01 | 0.0000 | 94.0 | 12.67% | 745.7 | 3.27% | motif file (matrix) |
svg |
13 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-16 | -3.815e+01 | 0.0000 | 65.0 | 8.76% | 584.5 | 2.56% | motif file (matrix) |
svg |
14 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-15 | -3.572e+01 | 0.0000 | 309.0 | 41.64% | 6336.9 | 27.75% | motif file (matrix) |
svg |
15 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-14 | -3.238e+01 | 0.0000 | 48.0 | 6.47% | 386.6 | 1.69% | motif file (matrix) |
svg |
16 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-13 | -3.118e+01 | 0.0000 | 56.0 | 7.55% | 527.0 | 2.31% | motif file (matrix) |
svg |
17 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-11 | -2.675e+01 | 0.0000 | 70.0 | 9.43% | 846.6 | 3.71% | motif file (matrix) |
svg |
18 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-10 | -2.362e+01 | 0.0000 | 73.0 | 9.84% | 969.6 | 4.25% | motif file (matrix) |
svg |
19 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-9 | -2.251e+01 | 0.0000 | 211.0 | 28.44% | 4307.2 | 18.86% | motif file (matrix) |
svg |
20 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-9 | -2.134e+01 | 0.0000 | 32.0 | 4.31% | 265.5 | 1.16% | motif file (matrix) |
svg |
21 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-8 | -1.991e+01 | 0.0000 | 144.0 | 19.41% | 2708.0 | 11.86% | motif file (matrix) |
svg |
22 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-8 | -1.879e+01 | 0.0000 | 145.0 | 19.54% | 2780.2 | 12.18% | motif file (matrix) |
svg |
23 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-7 | -1.770e+01 | 0.0000 | 47.0 | 6.33% | 580.6 | 2.54% | motif file (matrix) |
svg |
24 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-7 | -1.675e+01 | 0.0000 | 44.0 | 5.93% | 541.5 | 2.37% | motif file (matrix) |
svg |
25 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-6 | -1.590e+01 | 0.0000 | 35.0 | 4.72% | 389.4 | 1.71% | motif file (matrix) |
svg |
26 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.507e+01 | 0.0000 | 21.0 | 2.83% | 168.4 | 0.74% | motif file (matrix) |
svg |
27 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-6 | -1.400e+01 | 0.0000 | 27.0 | 3.64% | 278.6 | 1.22% | motif file (matrix) |
svg |
28 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-6 | -1.382e+01 | 0.0000 | 90.0 | 12.13% | 1638.5 | 7.18% | motif file (matrix) |
svg |
29 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-5 | -1.301e+01 | 0.0000 | 12.0 | 1.62% | 65.8 | 0.29% | motif file (matrix) |
svg |
30 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-5 | -1.287e+01 | 0.0000 | 41.0 | 5.53% | 565.8 | 2.48% | motif file (matrix) |
svg |
31 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-5 | -1.286e+01 | 0.0000 | 46.0 | 6.20% | 669.2 | 2.93% | motif file (matrix) |
svg |
32 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-5 | -1.227e+01 | 0.0001 | 35.0 | 4.72% | 458.7 | 2.01% | motif file (matrix) |
svg |
33 |
| Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer | 1e-5 | -1.211e+01 | 0.0001 | 17.0 | 2.29% | 140.6 | 0.62% | motif file (matrix) |
svg |
34 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-5 | -1.194e+01 | 0.0001 | 45.0 | 6.06% | 672.3 | 2.94% | motif file (matrix) |
svg |
35 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-5 | -1.166e+01 | 0.0001 | 94.0 | 12.67% | 1829.0 | 8.01% | motif file (matrix) |
svg |
36 |
| Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer | 1e-4 | -1.099e+01 | 0.0002 | 123.0 | 16.58% | 2605.8 | 11.41% | motif file (matrix) |
svg |
37 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-4 | -1.092e+01 | 0.0002 | 39.0 | 5.26% | 572.1 | 2.51% | motif file (matrix) |
svg |
38 |
| Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer | 1e-3 | -9.078e+00 | 0.0011 | 110.0 | 14.82% | 2378.7 | 10.42% | motif file (matrix) |
svg |
39 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-3 | -8.961e+00 | 0.0012 | 17.0 | 2.29% | 181.7 | 0.80% | motif file (matrix) |
svg |
40 |
| Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer | 1e-3 | -8.926e+00 | 0.0012 | 143.0 | 19.27% | 3272.6 | 14.33% | motif file (matrix) |
svg |
41 |
| OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-3 | -8.853e+00 | 0.0013 | 3.0 | 0.40% | 3.7 | 0.02% | motif file (matrix) |
svg |
42 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-3 | -8.724e+00 | 0.0014 | 45.0 | 6.06% | 772.1 | 3.38% | motif file (matrix) |
svg |
43 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-3 | -7.804e+00 | 0.0035 | 238.0 | 32.08% | 6048.3 | 26.49% | motif file (matrix) |
svg |
44 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-3 | -7.740e+00 | 0.0036 | 48.0 | 6.47% | 881.0 | 3.86% | motif file (matrix) |
svg |
45 |
| Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-3 | -7.537e+00 | 0.0043 | 114.0 | 15.36% | 2587.7 | 11.33% | motif file (matrix) |
svg |
46 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-3 | -7.414e+00 | 0.0048 | 79.0 | 10.65% | 1670.6 | 7.32% | motif file (matrix) |
svg |
47 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-2 | -6.399e+00 | 0.0129 | 59.0 | 7.95% | 1215.4 | 5.32% | motif file (matrix) |
svg |
48 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-2 | -6.368e+00 | 0.0130 | 57.0 | 7.68% | 1166.1 | 5.11% | motif file (matrix) |
svg |
49 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-2 | -6.086e+00 | 0.0169 | 80.0 | 10.78% | 1780.9 | 7.80% | motif file (matrix) |
svg |
50 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-2 | -6.069e+00 | 0.0169 | 64.0 | 8.63% | 1362.4 | 5.97% | motif file (matrix) |
svg |
51 |
| Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer | 1e-2 | -5.549e+00 | 0.0278 | 37.0 | 4.99% | 709.4 | 3.11% | motif file (matrix) |
svg |
52 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-2 | -5.523e+00 | 0.0279 | 49.0 | 6.60% | 1009.4 | 4.42% | motif file (matrix) |
svg |
53 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-2 | -5.273e+00 | 0.0352 | 57.0 | 7.68% | 1229.7 | 5.39% | motif file (matrix) |
svg |
54 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.241e+00 | 0.0357 | 77.0 | 10.38% | 1760.4 | 7.71% | motif file (matrix) |
svg |
55 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-2 | -5.170e+00 | 0.0376 | 115.0 | 15.50% | 2808.0 | 12.30% | motif file (matrix) |
svg |
56 |
| ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.106e+00 | 0.0394 | 26.0 | 3.50% | 465.0 | 2.04% | motif file (matrix) |
svg |
57 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-2 | -5.068e+00 | 0.0402 | 58.0 | 7.82% | 1268.9 | 5.56% | motif file (matrix) |
svg |
58 |
| RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer | 1e-2 | -4.938e+00 | 0.0450 | 50.0 | 6.74% | 1068.5 | 4.68% | motif file (matrix) |
svg |
59 |
| NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer | 1e-2 | -4.823e+00 | 0.0496 | 26.0 | 3.50% | 475.5 | 2.08% | motif file (matrix) |
svg |
60 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-2 | -4.810e+00 | 0.0496 | 48.0 | 6.47% | 1024.4 | 4.49% | motif file (matrix) |
svg |
61 |
| FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-2 | -4.779e+00 | 0.0501 | 6.0 | 0.81% | 53.0 | 0.23% | motif file (matrix) |
svg |
62 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-2 | -4.762e+00 | 0.0502 | 60.0 | 8.09% | 1341.2 | 5.87% | motif file (matrix) |
svg |
63 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-2 | -4.714e+00 | 0.0518 | 63.0 | 8.49% | 1424.3 | 6.24% | motif file (matrix) |
svg |
64 |
| RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer | 1e-2 | -4.656e+00 | 0.0541 | 40.0 | 5.39% | 829.0 | 3.63% | motif file (matrix) |
svg |