Information for 12-CAGCTHTTGTGTT (Motif 8)

A G T C C G T A A C T G A G T C C G A T G C T A A C G T A C G T C T A G A C G T A T C G A C G T A C G T
Reverse Opposite:
C G T A C G T A A T G C C G T A A G T C C G T A C G T A C A G T C G T A A C T G A G T C C G A T C T A G
p-value:1e-12
log p-value:-2.774e+01
Information Content per bp:1.827
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.4 +/- 26.7bp
Average Position of motif in Background79.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CAGCTHTTGTGTT--
NNNCCATTGTGTNAN
 A G T C C G T A A C T G A G T C C G A T G C T A A C G T A C G T C T A G A C G T A T C G A C G T A C G T A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CAGCTHTTGTGTT
---CCTTTGTTTT
 A G T C C G T A A C T G A G T C C G A T G C T A A C G T A C G T C T A G A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CAGCTHTTGTGTT
--NCCATTGTTY-
 A G T C C G T A A C T G A G T C C G A T G C T A A C G T A C G T C T A G A C G T A T C G A C G T A C G T
A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CAGCTHTTGTGTT
---CCATTGTTNY
 A G T C C G T A A C T G A G T C C G A T G C T A A C G T A C G T C T A G A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

PB0183.1_Sry_2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAGCTHTTGTGTT----
CNNNTATTGTTCNNNNN
 A G T C C G T A A C T G A G T C C G A T G C T A A C G T A C G T C T A G A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CAGCTHTTGTGTT
---CCATTGTTTT
 A G T C C G T A A C T G A G T C C G A T G C T A A C G T A C G T C T A G A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CAGCTHTTGTGTT
---CCWTTGTY--
 A G T C C G T A A C T G A G T C C G A T G C T A A C G T A C G T C T A G A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T

Tcf21/MA0832.1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CAGCTHTTGTGTT
NCAACAGCTGTTGC---
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G A T G C T A A C G T A C G T C T A G A C G T A T C G A C G T A C G T
T C G A A G T C C T G A T G C A A G T C C G T A T A C G G T A C A C G T A C T G A C G T G A C T C T A G A G T C A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CAGCTHTTGTGTT
---CCATTGTTYB
 A G T C C G T A A C T G A G T C C G A T G C T A A C G T A C G T C T A G A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

SRY/MA0084.1/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CAGCTHTTGTGTT-
-----ATTGTTTAN
 A G T C C G T A A C T G A G T C C G A T G C T A A C G T A C G T C T A G A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C