Information for 13-CGACCCTGAGCTA (Motif 16)

A G T C A C T G G T C A A G T C A G T C A G T C A C G T A C T G C G T A A T C G A G T C A C G T C G T A
Reverse Opposite:
G C A T C G T A A C T G A T G C A C G T A G T C C G T A A C T G A C T G A C T G A C G T A G T C A C T G
p-value:1e-4
log p-value:-1.060e+01
Information Content per bp:1.937
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.4 +/- 25.1bp
Average Position of motif in Background47.3 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CGACCCTGAGCTA
TGACCTTGACCT-
 A G T C A C T G G T C A A G T C A G T C A G T C A C G T A C T G C G T A A T C G A G T C A C G T C G T A
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CGACCCTGAGCTA
TGACCTTGACCT-
 A G T C A C T G G T C A A G T C A G T C A G T C A C G T A C T G C G T A A T C G A G T C A C G T C G T A
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGACCCTGAGCTA
GCTGACCTTGAACTN
 A C G T A C G T A G T C A C T G G T C A A G T C A G T C A G T C A C G T A C T G C G T A A T C G A G T C A C G T C G T A
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGACCCTGAGCTA
-GAGSCCGAGC--
 A G T C A C T G G T C A A G T C A G T C A G T C A C G T A C T G C G T A A T C G A G T C A C G T C G T A
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGACCCTGAGCTA
AAGACCCYYN----
 A C G T A G T C A C T G G T C A A G T C A G T C A G T C A C G T A C T G C G T A A T C G A G T C A C G T C G T A
T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGACCCTGAGCTA
NATGACCTTGA----
 A C G T A C G T A G T C A C T G G T C A A G T C A G T C A G T C A C G T A C T G C G T A A T C G A G T C A C G T C G T A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGACCCTGAGCTA
TGACCTTGAN---
 A G T C A C T G G T C A A G T C A G T C A G T C A C G T A C T G C G T A A T C G A G T C A C G T C G T A
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGACCCTGAGCTA
TGACCTTGAV---
 A G T C A C T G G T C A A G T C A G T C A G T C A C G T A C T G C G T A A T C G A G T C A C G T C G T A
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CGACCCTGAGCTA
NNCNTGACCCCGCTCT-
 A C G T A C G T A C G T A C G T A G T C A C T G G T C A A G T C A G T C A G T C A C G T A C T G C G T A A T C G A G T C A C G T C G T A
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGACCCTGAGCTA
ATGACCTTGAA---
 A C G T A G T C A C T G G T C A A G T C A G T C A G T C A C G T A C T G C G T A A T C G A G T C A C G T C G T A
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T A C G T