Information for 9-CCCTGGGGACTGA (Motif 11)

A G T C A G T C T A G C A C G T A C T G A C T G C T A G A C T G G T C A A G T C A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C T G A C G T A G T C A G T C A G T C A G T C C G T A A C T G A C T G A C T G
p-value:1e-8
log p-value:-1.946e+01
Information Content per bp:1.906
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.2 +/- 24.7bp
Average Position of motif in Background58.9 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGGGGACTGA
TCCCCTGGGGAC---
 A C G T A C G T A G T C A G T C T A G C A C G T A C T G A C T G C T A G A C T G G T C A A G T C A C G T A C T G C G T A
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGGGGACTGA
TCCCNNGGGACN--
 A C G T A G T C A G T C T A G C A C G T A C T G A C T G C T A G A C T G G T C A A G T C A C G T A C T G C G T A
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGGGGACTGA
ANTCCCTNGGGAAT--
 A C G T A C G T A C G T A G T C A G T C T A G C A C G T A C T G A C T G C T A G A C T G G T C A A G T C A C G T A C T G C G T A
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCCTGGGGACTGA
---TGGGGA----
 A G T C A G T C T A G C A C G T A C T G A C T G C T A G A C T G G T C A A G T C A C G T A C T G C G T A
A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGGGGACTGA
TTGCCATGGCAACN--
 A C G T A C G T A C G T A G T C A G T C T A G C A C G T A C T G A C T G C T A G A C T G G T C A A G T C A C G T A C T G C G T A
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CCCTGGGGACTGA
-----NNNANTGA
 A G T C A G T C T A G C A C G T A C T G A C T G C T A G A C T G G T C A A G T C A C G T A C T G C G T A
A C G T A C G T A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

Rfx1/MA0509.1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCCTGGGGACTGA
GTTGCCATGGCAAC---
 A C G T A C G T A C G T A C G T A G T C A G T C T A G C A C G T A C T G A C T G C T A G A C T G G T C A A G T C A C G T A C T G C G T A
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CCCTGGGGACTGA
GTTGCCATGGCAACCG-
 A C G T A C G T A C G T A C G T A G T C A G T C T A G C A C G T A C T G A C T G C T A G A C T G G T C A A G T C A C G T A C T G C G T A
C T A G A G C T G A C T C T A G A G T C A G T C G T C A C G A T T C A G T C A G G A T C C T G A T C G A G A T C T A G C T C A G A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCCTGGGGACTGA
CCCCCCCGGGGGGGT--
 A C G T A C G T A C G T A C G T A G T C A G T C T A G C A C G T A C T G A C T G C T A G A C T G G T C A A G T C A C G T A C T G C G T A
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCCTGGGGACTGA--
CTACTTGGATACGGAAT
 A C G T A C G T A G T C A G T C T A G C A C G T A C T G A C T G C T A G A C T G G T C A A G T C A C G T A C T G C G T A A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T