Information for 4-ATTAAACTGGCTG (Motif 9)

G C T A A G C T C G A T C G T A C G T A C T G A T A G C C G A T C A T G C A T G A G T C C G A T C T A G
Reverse Opposite:
G A T C C G T A C T A G G T A C G A T C C G T A A T C G A G C T G C A T G C A T G C T A T C G A C G A T
p-value:1e-12
log p-value:-2.835e+01
Information Content per bp:1.642
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif4.16%
Number of Background Sequences with motif402.9
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets47.1 +/- 22.8bp
Average Position of motif in Background51.1 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.66
Offset:6
Orientation:forward strand
Alignment:ATTAAACTGGCTG-
------TWGTCTGV
 G C T A A G C T C G A T C G T A C G T A C T G A T A G C C G A T C A T G C A T G A G T C C G A T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Myb/MA0100.2/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ATTAAACTGGCTG
--CCAACTGCCA-
 G C T A A G C T C G A T C G T A C G T A C T G A T A G C C G A T C A T G C A T G A G T C C G A T C T A G
A C G T A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.64
Offset:6
Orientation:forward strand
Alignment:ATTAAACTGGCTG-
------CTGTCTGG
 G C T A A G C T C G A T C G T A C G T A C T G A T A G C C G A T C A T G C A T G A G T C C G A T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ATTAAACTGGCTG-
--CAAGATGGCGGC
 G C T A A G C T C G A T C G T A C G T A C T G A T A G C C G A T C A T G C A T G A G T C C G A T C T A G A C G T
A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATTAAACTGGCTG------
--NNTNNTGTCTGGNNTNG
 G C T A A G C T C G A T C G T A C G T A C T G A T A G C C G A T C A T G C A T G A G T C C G A T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:ATTAAACTGGCTG-
----VBSYGTCTGG
 G C T A A G C T C G A T C G T A C G T A C T G A T A G C C G A T C A T G C A T G A G T C C G A T C T A G A C G T
A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

PH0114.1_Nkx2-5/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATTAAACTGGCTG-
AAATTCAAGTGGNTTN
 A C G T A C G T G C T A A G C T C G A T C G T A C G T A C T G A T A G C C G A T C A T G C A T G A G T C C G A T C T A G A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

YY1(Zf)/Promoter/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ATTAAACTGGCTG-
--CAAGATGGCGGC
 G C T A A G C T C G A T C G T A C G T A C T G A T A G C C G A T C A T G C A T G A G T C C G A T C T A G A C G T
A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ATTAAACTGGCTG-
AANTTCAAGTGGCTTN
 A C G T A C G T G C T A A G C T C G A T C G T A C G T A C T G A T A G C C G A T C A T G C A T G A G T C C G A T C T A G A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

PH0115.1_Nkx2-6/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ATTAAACTGGCTG-
AATNTTAAGTGGNTNN
 A C G T A C G T G C T A A G C T C G A T C G T A C G T A C T G A T A G C C G A T C A T G C A T G A G T C C G A T C T A G A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A