Information for 9-ATATCATGAA (Motif 35)

C G T A A C G T C G T A A C G T A G T C C T G A A C G T A C T G C G T A C G T A
Reverse Opposite:
C G A T C G A T A G T C C G T A A G C T A C T G C G T A A C G T C G T A A C G T
p-value:1e-7
log p-value:-1.751e+01
Information Content per bp:1.921
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif19.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets58.4 +/- 28.6bp
Average Position of motif in Background53.8 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ATATCATGAA---
NNTNTCATGAATGT
 A C G T C G T A A C G T C G T A A C G T A G T C C T G A A C G T A C T G C G T A C G T A A C G T A C G T A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

PB0105.1_Arid3a_2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ATATCATGAA-
ACCCGTATCAAATTT
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A G T C C T G A A C G T A C T G C G T A C G T A A C G T
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATATCATGAA
AAGATATCCTT--
 A C G T A C G T A C G T C G T A A C G T C G T A A C G T A G T C C T G A A C G T A C T G C G T A C G T A
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T

PH0161.1_Six1/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------ATATCATGAA-
GATGGGGTATCATTTTT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A G T C C T G A A C G T A C T G C G T A C G T A A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

HOXC10/MA0905.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ATATCATGAA--
--GTCGTAAAAT
 C G T A A C G T C G T A A C G T A G T C C T G A A C G T A C T G C G T A C G T A A C G T A C G T
A C G T A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

PH0166.1_Six6_2/Jaspar

Match Rank:6
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------ATATCATGAA-
AATAGGGTATCAATATT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A G T C C T G A A C G T A C T G C G T A C G T A A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATATCATGAA
ATTTCCTGTN
 C G T A A C G T C G T A A C G T A G T C C T G A A C G T A C T G C G T A C G T A
T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

GATA5/MA0766.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATATCATGAA
TCTTATCT----
 A C G T A C G T C G T A A C G T C G T A A C G T A G T C C T G A A C G T A C T G C G T A C G T A
A G C T A T G C G A C T C G A T C G T A A G C T A G T C C G A T A C G T A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATATCATGAA-------
NTTNTATGAATGTGNNC
 C G T A A C G T C G T A A C G T A G T C C T G A A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ATATCATGAA
--GTCATN--
 C G T A A C G T C G T A A C G T A G T C C T G A A C G T A C T G C G T A C G T A
A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T