Information for 7-MWCTTGACTTGAC (Motif 16)

G T C A C G A T G T A C A C G T A C G T A C T G C G T A A G T C C G A T A C G T A C T G C G T A G T A C
Reverse Opposite:
A C T G A C G T A G T C G T C A C G T A C T A G C G A T G T A C C G T A C G T A A C T G C G T A C A G T
p-value:1e-10
log p-value:-2.518e+01
Information Content per bp:1.904
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.5 +/- 26.8bp
Average Position of motif in Background65.1 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:MWCTTGACTTGAC
---TTGACTTTT-
 G T C A C G A T G T A C A C G T A C G T A C T G C G T A A G T C C G A T A C G T A C T G C G T A G T A C
A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-MWCTTGACTTGAC
NNACTTGCCTT---
 A C G T G T C A C G A T G T A C A C G T A C G T A C T G C G T A A G T C C G A T A C G T A C T G C G T A G T A C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:MWCTTGACTTGAC-
----TGTCTAGACG
 G T C A C G A T G T A C A C G T A C G T A C T G C G T A A G T C C G A T A C G T A C T G C G T A G T A C A C G T
A C G T A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

CRE(bZIP)/Promoter/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:MWCTTGACTTGAC
-CGGTGACGTCAC
 G T C A C G A T G T A C A C G T A C G T A C T G C G T A A G T C C G A T A C G T A C T G C G T A G T A C
A C G T A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C

E-box(bHLH)/Promoter/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:MWCTTGACTTGAC---
----TCACGTGACCGG
 G T C A C G A T G T A C A C G T A C G T A C T G C G T A A G T C C G A T A C G T A C T G C G T A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

PH0171.1_Nkx2-1/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----MWCTTGACTTGAC
TAAGCCACTTGAAATT--
 A C G T A C G T A C G T A C G T A C G T G T C A C G A T G T A C A C G T A C G T A C T G C G T A A G T C C G A T A C G T A C T G C G T A G T A C
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T A C G T A C G T

RARA(var.2)/MA0730.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--MWCTTGACTTGAC--
TGACCTTTGCATGACCT
 A C G T A C G T G T C A C G A T G T A C A C G T A C G T A C T G C G T A A G T C C G A T A C G T A C T G C G T A G T A C A C G T A C G T
G A C T T A C G T G C A T G A C G T A C A G C T A G C T G C A T T C A G T A G C C T G A A C G T C T A G T G C A T G A C G T A C A G C T

Rarb(var.2)/MA0858.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--MWCTTGACTTGAC--
TGACCTTTANTTGACCT
 A C G T A C G T G T C A C G A T G T A C A C G T A C G T A C T G C G T A A G T C C G A T A C G T A C T G C G T A G T A C A C G T A C G T
G A C T C T A G T G C A T G A C A G T C G A C T A G C T G C A T T C G A A C T G C A G T A G C T A T C G C T G A G T A C A T G C A G C T

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:MWCTTGACTTGAC-
------NCGTGACN
 G T C A C G A T G T A C A C G T A C G T A C T G C G T A A G T C C G A T A C G T A C T G C G T A G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--MWCTTGACTTGAC
TGACCTTGACCT---
 A C G T A C G T G T C A C G A T G T A C A C G T A C G T A C T G C G T A A G T C C G A T A C G T A C T G C G T A G T A C
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T