Information for 6-GGCCTTGGAGAGAGAG (Motif 9)

A C T G C T A G A T G C A G T C A G C T C G A T A C T G A C T G C G T A A T C G C T G A A C T G C G T A C T A G C T G A A C T G
Reverse Opposite:
A G T C G A C T A G T C A C G T A G T C A G C T A T G C A C G T A G T C A G T C C G T A C T G A A C T G A T C G A G T C G T A C
p-value:1e-9
log p-value:-2.172e+01
Information Content per bp:1.828
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.2 +/- 24.0bp
Average Position of motif in Background28.9 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTTGGAGAGAGAG
TGACCTTGAN-------
 A C G T A C T G C T A G A T G C A G T C A G C T C G A T A C T G A C T G C G T A A T C G C T G A A C T G C G T A C T A G C T G A A C T G
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GGCCTTGGAGAGAGAG
-----GGGCGGGAAGG
 A C T G C T A G A T G C A G T C A G C T C G A T A C T G A C T G C G T A A T C G C T G A A C T G C G T A C T A G C T G A A C T G
A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTTGGAGAGAGAG
TGACCTTGAV-------
 A C G T A C T G C T A G A T G C A G T C A G C T C G A T A C T G A C T G C G T A A T C G C T G A A C T G C G T A C T A G C T G A A C T G
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GGCCTTGGAGAGAGAG
BNTGDCCTTG---------
 A C G T A C G T A C G T A C T G C T A G A T G C A G T C A G C T C G A T A C T G A C T G C G T A A T C G C T G A A C T G C G T A C T A G C T G A A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGCCTTGGAGAGAGAG
AGGCCTAG---------
 A C G T A C T G C T A G A T G C A G T C A G C T C G A T A C T G A C T G C G T A A T C G C T G A A C T G C G T A C T A G C T G A A C T G
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GGCCTTGGAGAGAGAG
------GGCGGGAARN
 A C T G C T A G A T G C A G T C A G C T C G A T A C T G A C T G C G T A A T C G C T G A A C T G C G T A C T A G C T G A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGCCTTGGAGAGAGAG
---BTKGGCGGGAAA-
 A C T G C T A G A T G C A G T C A G C T C G A T A C T G A C T G C G T A A T C G C T G A A C T G C G T A C T A G C T G A A C T G
A C G T A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T

E2F8/MA0865.1/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GGCCTTGGAGAGAGAG
---TTTGGCGGGAAA-
 A C T G C T A G A T G C A G T C A G C T C G A T A C T G A C T G C G T A A T C G C T G A A C T G C G T A C T A G C T G A A C T G
A C G T A C G T A C G T C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A A C G T

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GGCCTTGGAGAGAGAG
CAGGCCNNGGCCNN----
 A C G T A C G T A C T G C T A G A T G C A G T C A G C T C G A T A C T G A C T G C G T A A T C G C T G A A C T G C G T A C T A G C T G A A C T G
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------GGCCTTGGAGAGAGAG
NNNNATGACCTTGANTN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A T G C A G T C A G C T C G A T A C T G A C T G C G T A A T C G C T G A A C T G C G T A C T A G C T G A A C T G
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T A C G T A C G T A C G T A C G T