Information for 3-GAGGARAGGCTRG (Motif 5)

A C T G C G T A A C T G A C T G C T G A C T A G C G T A A C T G A T C G A G T C G A C T C T A G A C T G
Reverse Opposite:
G T A C A G T C C T G A C T A G A T G C A G T C A C G T A G T C A G C T A G T C A G T C A C G T A G T C
p-value:1e-11
log p-value:-2.591e+01
Information Content per bp:1.803
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif43.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets49.0 +/- 21.3bp
Average Position of motif in Background52.0 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GAGGARAGGCTRG
GGGAGGACNG-----
 A C G T A C G T A C T G C G T A A C T G A C T G C T G A C T A G C G T A A C T G A T C G A G T C G A C T C T A G A C T G
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAGGARAGGCTRG
TRAGGTCA------
 A C G T A C T G C G T A A C T G A C T G C T G A C T A G C G T A A C T G A T C G A G T C G A C T C T A G A C T G
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAGGARAGGCTRG
AGAGGAA-------
 A C G T A C T G C G T A A C T G A C T G C T G A C T A G C G T A A C T G A T C G A G T C G A C T C T A G A C T G
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAGGARAGGCTRG
TGGGGAAGGGCM--
 A C G T A C T G C G T A A C T G A C T G C T G A C T A G C G T A A C T G A T C G A G T C G A C T C T A G A C T G
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GAGGARAGGCTRG
TAGGGCAAAGGTCA-
 A C G T A C G T A C T G C G T A A C T G A C T G C T G A C T A G C G T A A C T G A T C G A G T C G A C T C T A G A C T G
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GAGGARAGGCTRG
GTAGGGCAAAGGTCA-
 A C G T A C G T A C G T A C T G C G T A A C T G A C T G C T G A C T A G C G T A A C T G A T C G A G T C G A C T C T A G A C T G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

MZF1/MA0056.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAGGARAGGCTRG
TGGGGA--------
 A C G T A C T G C G T A A C T G A C T G C T G A C T A G C G T A A C T G A T C G A G T C G A C T C T A G A C T G
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GAGGARAGGCTRG
NDCAGGAARTNN---
 A C G T A C G T A C T G C G T A A C T G A C T G C T G A C T A G C G T A A C T G A T C G A G T C G A C T C T A G A C T G
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T A C G T

ZNF263/MA0528.1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GAGGARAGGCTRG----
GGAGGAGGAGGGGGAGGAGGA
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G C T G A C T A G C G T A A C T G A T C G A G T C G A C T C T A G A C T G A C G T A C G T A C G T A C G T
C T A G C T A G C T G A C A T G T A C G G C T A C A T G T C A G T C G A T C A G C T A G C T A G C T A G T C A G C T G A C T A G C T A G C T G A C T A G C T A G C T G A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GAGGARAGGCTRG---
-----AAGGCAAGTGT
 A C T G C G T A A C T G A C T G C T G A C T A G C G T A A C T G A T C G A G T C G A C T C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T