Information for 3-GAGGAGGGSCACCTGC (Motif 4)

A T C G C G T A A C T G C T A G C T G A A C T G A C T G A T C G A T G C A T G C G T C A A T G C A G T C A C G T A T C G A T G C
Reverse Opposite:
T A C G T A G C C G T A C T A G A T C G C A G T A T C G A T C G T A G C A G T C A G T C A G C T A G T C A G T C A C G T A T G C
p-value:1e-11
log p-value:-2.677e+01
Information Content per bp:1.761
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.7 +/- 23.2bp
Average Position of motif in Background61.3 +/- 8.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GAGGAGGGSCACCTGC--
------SNGCACCTGCHS
 A T C G C G T A A C T G C T A G C T G A A C T G A C T G A T C G A T G C A T G C G T C A A T G C A G T C A C G T A T C G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

SP1/MA0079.3/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAGGAGGGSCACCTGC
GGGGGCGGGGC------
 A C G T A T C G C G T A A C T G C T A G C T G A A C T G A C T G A T C G A T G C A T G C G T C A A T G C A G T C A C G T A T C G A T G C
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAGGAGGGSCACCTGC
TTGGGGGCGCCCCTAG
 A T C G C G T A A C T G C T A G C T G A A C T G A C T G A T C G A T G C A T G C G T C A A T G C A G T C A C G T A T C G A T G C
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GAGGAGGGSCACCTGC
GGGNGGGGGCGGGGC------
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A A C T G C T A G C T G A A C T G A C T G A T C G A T G C A T G C G T C A A T G C A G T C A C G T A T C G A T G C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAGGAGGGSCACCTGC
TGGGGAAGGGCM-----
 A C G T A T C G C G T A A C T G C T A G C T G A A C T G A C T G A T C G A T G C A T G C G T C A A T G C A G T C A C G T A T C G A T G C
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GAGGAGGGSCACCTGC-
-------NNCACCTGNN
 A T C G C G T A A C T G C T A G C T G A A C T G A C T G A T C G A T G C A T G C G T C A A T G C A G T C A C G T A T C G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GAGGAGGGSCACCTGC-
-------CGCACCTGCT
 A T C G C G T A A C T G C T A G C T G A A C T G A C T G A T C G A T G C A T G C G T C A A T G C A G T C A C G T A T C G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:GAGGAGGGSCACCTGC-
--------NCACCTGTN
 A T C G C G T A A C T G C T A G C T G A A C T G A C T G A T C G A T G C A T G C G T C A A T G C A G T C A C G T A T C G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

TCF3/MA0522.2/Jaspar

Match Rank:9
Score:0.52
Offset:7
Orientation:forward strand
Alignment:GAGGAGGGSCACCTGC-
-------AACACCTGCT
 A T C G C G T A A C T G C T A G C T G A A C T G A C T G A T C G A T G C A T G C G T C A A T G C A G T C A C G T A T C G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T

ID4/MA0824.1/Jaspar

Match Rank:10
Score:0.51
Offset:7
Orientation:forward strand
Alignment:GAGGAGGGSCACCTGC-
-------TACACCTGTC
 A T C G C G T A A C T G C T A G C T G A A C T G A C T G A T C G A T G C A T G C G T C A A T G C A G T C A C G T A T C G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C