Information for 2-GGARWGTGGCACA (Motif 2)

A C T G A C T G T C G A C T G A G C T A A C T G A C G T A C T G A C T G A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T C T A G A C G T A C T G A G T C A G T C C G T A G T A C C G A T A G C T A C G T A G T C A G T C
p-value:1e-12
log p-value:-2.880e+01
Information Content per bp:1.911
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets57.8 +/- 21.1bp
Average Position of motif in Background59.9 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGARWGTGGCACA--
NGTAGGTTGGCATNNN
 A C G T A C T G A C T G T C G A C T G A G C T A A C T G A C G T A C T G A C T G A G T C C G T A A G T C C G T A A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGARWGTGGCACA
---GGTTGGCAT-
 A C T G A C T G T C G A C T G A G C T A A C T G A C G T A C T G A C T G A G T C C G T A A G T C C G T A
A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GGARWGTGGCACA-------
----CGAAGCACACAAAATA
 A C T G A C T G T C G A C T G A G C T A A C T G A C G T A C T G A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGARWGTGGCACA
---NNTTGGCANN
 A C T G A C T G T C G A C T G A G C T A A C T G A C G T A C T G A C T G A G T C C G T A A G T C C G T A
A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GGARWGTGGCACA
----NTTGGCANN
 A C T G A C T G T C G A C T G A G C T A A C T G A C G T A C T G A C T G A G T C C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

TEAD1/MA0090.2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGARWGTGGCACA
NTGGAATGTG-----
 A C G T A C G T A C T G A C T G T C G A C T G A G C T A A C T G A C G T A C T G A C T G A G T C C G T A A G T C C G T A
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GGARWGTGGCACA
-----TTGGCA--
 A C T G A C T G T C G A C T G A G C T A A C T G A C G T A C T G A C T G A G T C C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGARWGTGGCACA
NTGGAATGTN-----
 A C G T A C G T A C T G A C T G T C G A C T G A G C T A A C T G A C G T A C T G A C T G A G T C C G T A A G T C C G T A
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGARWGTGGCACA-------
----AGCGGCACACACGCAA
 A C T G A C T G T C G A C T G A G C T A A C T G A C G T A C T G A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGARWGTGGCACA
TGGAATGT------
 A C G T A C T G A C T G T C G A C T G A G C T A A C T G A C G T A C T G A C T G A G T C C G T A A G T C C G T A
G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T