Information for 6-ATGCCAGGGG (Motif 15)

C T G A A C G T A C T G A T G C G T A C C G T A C T A G C T A G C A T G C T A G
Reverse Opposite:
A G T C G T A C G A T C A G T C C G A T A C T G T A C G A G T C G T C A A G C T
p-value:1e-8
log p-value:-1.864e+01
Information Content per bp:1.778
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif4.42%
Number of Background Sequences with motif574.0
Percentage of Background Sequences with motif1.14%
Average Position of motif in Targets48.1 +/- 24.6bp
Average Position of motif in Background48.4 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.80
Offset:1
Orientation:forward strand
Alignment:ATGCCAGGGG---
-TGTCAGGGGGCG
 C T G A A C G T A C T G A T G C G T A C C G T A C T A G C T A G C A T G C T A G A C G T A C G T A C G T
A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:ATGCCAGGGG
TTGCCAAG--
 C T G A A C G T A C T G A T G C G T A C C G T A C T A G C T A G C A T G C T A G
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ATGCCAGGGG
CGTGCCAAG--
 A C G T C T G A A C G T A C T G A T G C G T A C C G T A C T A G C T A G C A T G C T A G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ATGCCAGGGG
GGTGCCAAGT-
 A C G T C T G A A C G T A C T G A T G C G T A C C G T A C T A G C T A G C A T G C T A G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ATGCCAGGGG
RHTGWCAR---
 A C G T C T G A A C G T A C T G A T G C G T A C C G T A C T A G C T A G C A T G C T A G
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ATGCCAGGGG
ATGCCAACC-
 C T G A A C G T A C T G A T G C G T A C C G T A C T A G C T A G C A T G C T A G
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ATGCCAGGGG
-TGCCAA---
 C T G A A C G T A C T G A T G C G T A C C G T A C T A G C T A G C A T G C T A G
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ATGCCAGGGG
-TGTCANYT-
 C T G A A C G T A C T G A T G C G T A C C G T A C T A G C T A G C A T G C T A G
A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATGCCAGGGG
TTGACAGG--
 C T G A A C G T A C T G A T G C G T A C C G T A C T A G C T A G C A T G C T A G
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATGCCAGGGG
ATGCCCACC-
 C T G A A C G T A C T G A T G C G T A C C G T A C T A G C T A G C A T G C T A G
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T