Information for 4-GGGAGCAAGT (Motif 13)

C T A G A C T G A T C G C G T A A C T G G T A C G T C A C T G A A C T G C G A T
Reverse Opposite:
C G T A G T A C G A C T A C G T A C T G G T A C C G A T A T G C A G T C A G T C
p-value:1e-8
log p-value:-2.031e+01
Information Content per bp:1.843
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.89%
Number of Background Sequences with motif217.1
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets59.5 +/- 23.5bp
Average Position of motif in Background52.2 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GGGAGCAAGT
CGGAGC----
 C T A G A C T G A T C G C G T A A C T G G T A C G T C A C T G A A C T G C G A T
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GGGAGCAAGT
GGGAGGACNG
 C T A G A C T G A T C G C G T A A C T G G T A C G T C A C T G A A C T G C G A T
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGGAGCAAGT-
-AGAGGAAGTG
 C T A G A C T G A T C G C G T A A C T G G T A C G T C A C T G A A C T G C G A T A C G T
A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

PB0155.1_Osr2_2/Jaspar

Match Rank:4
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GGGAGCAAGT
NNTGTAGGTAGCANNT
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A T C G C G T A A C T G G T A C G T C A C T G A A C T G C G A T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GGGAGCAAGT
NNNTTAGGTAGCNTNT
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A T C G C G T A A C T G G T A C G T C A C T G A A C T G C G A T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

PH0124.1_Obox5_1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GGGAGCAAGT---
TAGAGGGATTAAATTTC
 A C G T A C G T A C G T A C G T C T A G A C T G A T C G C G T A A C T G G T A C G T C A C T G A A C T G C G A T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GGGAGCAAGT--
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G A T C G C G T A A C T G G T A C G T C A C T G A A C T G C G A T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGGAGCAAGT----
--SDGCAGGTGCNS
 C T A G A C T G A T C G C G T A A C T G G T A C G T C A C T G A A C T G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGGAGCAAGT
TGGGGA------
 A C G T A C G T C T A G A C T G A T C G C G T A A C T G G T A C G T C A C T G A A C T G C G A T
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGGAGCAAGT--
---AACAGGTGT
 C T A G A C T G A T C G C G T A A C T G G T A C G T C A C T G A A C T G C G A T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T