Information for 3-CTAAGAGTGG (Motif 12)

G A T C G C A T C T G A C T G A T C A G C T G A T A C G A C G T C A T G T A C G
Reverse Opposite:
A T G C G T A C T G C A A T G C G A C T A G T C G A C T G A C T C G T A C T A G
p-value:1e-9
log p-value:-2.080e+01
Information Content per bp:1.673
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif4.93%
Number of Background Sequences with motif634.9
Percentage of Background Sequences with motif1.26%
Average Position of motif in Targets38.6 +/- 28.4bp
Average Position of motif in Background49.6 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTAAGAGTGG------
TGCGGAGTGGGACTGG
 G A T C G C A T C T G A C T G A T C A G C T G A T A C G A C G T C A T G T A C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTAAGAGTGG--
--TTGAGTGSTT
 G A T C G C A T C T G A C T G A T C A G C T G A T A C G A C G T C A T G T A C G A C G T A C G T
A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTAAGAGTGG--
--TTRAGTGSYK
 G A T C G C A T C T G A C T G A T C A G C T G A T A C G A C G T C A T G T A C G A C G T A C G T
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CTAAGAGTGG--
------GTGGAT
 G A T C G C A T C T G A C T G A T C A G C T G A T A C G A C G T C A T G T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTAAGAGTGG--
-CTTGAGTGGCT
 G A T C G C A T C T G A C T G A T C A G C T G A T A C G A C G T C A T G T A C G A C G T A C G T
A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTAAGAGTGG-
-CTYRAGTGSY
 G A T C G C A T C T G A C T G A T C A G C T G A T A C G A C G T C A T G T A C G A C G T
A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTAAGAGTGG-
-BTBRAGTGSN
 G A T C G C A T C T G A C T G A T C A G C T G A T A C G A C G T C A T G T A C G A C G T
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

GLI2/MA0734.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTAAGAGTGG----
--CAGTGTGGTCGC
 G A T C G C A T C T G A C T G A T C A G C T G A T A C G A C G T C A T G T A C G A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTAAGAGTGG
TTAAGTGGN-
 G A T C G C A T C T G A C T G A T C A G C T G A T A C G A C G T C A T G T A C G
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTAAGAGTGG
-NTCAAGTGG
 G A T C G C A T C T G A C T G A T C A G C T G A T A C G A C G T C A T G T A C G
A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G