Information for 2-GTGGNGTGGWCTWYAT (Motif 2)

C T A G G C A T A T C G A C T G A C T G A T C G A C G T C T A G C A T G C G A T G A T C G A C T C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A C G A T T C A G G C A T C G T A C T A G G C T A G T A C A G T C C G T A A T G C A G T C T G A C A T G C C G T A A G T C
p-value:1e-10
log p-value:-2.515e+01
Information Content per bp:1.662
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif7.25%
Number of Background Sequences with motif12.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets33.4 +/- 26.7bp
Average Position of motif in Background59.0 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTGGNGTGGWCTWYAT
ATGGGGTGAT------
 C T A G G C A T A T C G A C T G A C T G A T C G A C G T C T A G C A T G C G A T G A T C G A C T C G T A A G T C C G T A A C G T
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGGNGTGGWCTWYAT
GTGGCGTGACNG----
 C T A G G C A T A T C G A C T G A C T G A T C G A C G T C T A G C A T G C G A T G A T C G A C T C G T A A G T C C G T A A C G T
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T A C G T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGGNGTGGWCTWYAT
GTGGGGTGAT------
 C T A G G C A T A T C G A C T G A C T G A T C G A C G T C T A G C A T G C G A T G A T C G A C T C G T A A G T C C G T A A C G T
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTGGNGTGGWCTWYAT
ATGGGGTGAT------
 C T A G G C A T A T C G A C T G A C T G A T C G A C G T C T A G C A T G C G A T G A T C G A C T C G T A A G T C C G T A A C G T
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GTGGNGTGGWCTWYAT--
---GYCTGGYYTNTGTCA
 C T A G G C A T A T C G A C T G A C T G A T C G A C G T C T A G C A T G C G A T G A T C G A C T C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GTGGNGTGGWCTWYAT
-----GTGGAT-----
 C T A G G C A T A T C G A C T G A C T G A T C G A C G T C T A G C A T G C G A T G A T C G A C T C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GTGGNGTGGWCTWYAT
GAAAAGGTGTGAAAATT--
 A C G T A C G T A C G T C T A G G C A T A T C G A C T G A C T G A T C G A C G T C T A G C A T G C G A T G A T C G A C T C G T A A G T C C G T A A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T A C G T A C G T

SP3/MA0746.1/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GTGGNGTGGWCTWYAT
GGGGGCGTGGN------
 A C G T C T A G G C A T A T C G A C T G A C T G A T C G A C G T C T A G C A T G C G A T G A T C G A C T C G T A A G T C C G T A A C G T
C T A G C A T G T C A G C A T G C A T G G A T C C T A G A C G T C A T G C A T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GTGGNGTGGWCTWYAT
GGGGGTGTGTCC-----
 A C G T C T A G G C A T A T C G A C T G A C T G A T C G A C G T C T A G C A T G C G A T G A T C G A C T C G T A A G T C C G T A A C G T
T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GTGGNGTGGWCTWYAT
AAGGTGTGAAAAT---
 C T A G G C A T A T C G A C T G A C T G A T C G A C G T C T A G C A T G C G A T G A T C G A C T C G T A A G T C C G T A A C G T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T A C G T A C G T