Information for 2-TGGGAMTTGTAGT (Motif 3)

G A C T A C T G A C T G A C T G C T G A T G A C C A G T A G C T A C T G A C G T C G T A A C T G A C G T
Reverse Opposite:
G T C A A G T C A C G T G T C A A G T C T C G A G T C A A C T G A G C T A G T C A G T C A G T C C G T A
p-value:1e-40
log p-value:-9.385e+01
Information Content per bp:1.814
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.76%
Number of Background Sequences with motif76.4
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets53.4 +/- 26.0bp
Average Position of motif in Background43.7 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:TGGGAMTTGTAGT
-GGGAATTGTAGT
 G A C T A C T G A C T G A C T G C T G A T G A C C A G T A G C T A C T G A C G T C G T A A C T G A C G T
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.89
Offset:-6
Orientation:reverse strand
Alignment:------TGGGAMTTGTAGT-
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A C T G A C T G C T G A T G A C C A G T A G C T A C T G A C G T C G T A A C T G A C G T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.86
Offset:-6
Orientation:reverse strand
Alignment:------TGGGAMTTGTAGT-
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A C T G A C T G C T G A T G A C C A G T A G C T A C T G A C G T C G T A A C T G A C G T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

PB0032.1_IRC900814_1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGGGAMTTGTAGT----
-GNNATTTGTCGTAANN
 G A C T A C T G A C T G A C T G C T G A T G A C C A G T A G C T A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAMTTGTAGT
CSTGGGAAAD-----
 A C G T A C G T G A C T A C T G A C T G A C T G C T G A T G A C C A G T A G C T A C T G A C G T C G T A A C T G A C G T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:6
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------TGGGAMTTGTAGT
RGSMTBCTGGGAAAT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A C T G A C T G C T G A T G A C C A G T A G C T A C T G A C G T C G T A A C T G A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGGGAMTTGTAGT---
----NNHTGTGGTTWN
 G A C T A C T G A C T G A C T G C T G A T G A C C A G T A G C T A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

PB0098.1_Zfp410_1/Jaspar

Match Rank:8
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TGGGAMTTGTAGT
TATTATGGGATGGATAA-
 A C G T A C G T A C G T A C G T A C G T G A C T A C T G A C T G A C T G C T G A T G A C C A G T A G C T A C T G A C G T C G T A A C T G A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:TGGGAMTTGTAGT---
------CTGTGGTTTN
 G A C T A C T G A C T G A C T G C T G A T G A C C A G T A G C T A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:TGGGAMTTGTAGT--
-----GCTGTGGTTT
 G A C T A C T G A C T G A C T G C T G A T G A C C A G T A G C T A C T G A C G T C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T