Information for 3-CGCTGATTGG (Motif 2)

T G A C C A T G T A G C G A C T A T C G C G T A A G C T C G A T C T A G A T C G
Reverse Opposite:
A T G C A G T C C G T A C T G A G C A T A T G C C T G A A T C G G T A C A C T G
p-value:1e-51
log p-value:-1.177e+02
Information Content per bp:1.683
Number of Target Sequences with motif189.0
Percentage of Target Sequences with motif23.68%
Number of Background Sequences with motif3057.9
Percentage of Background Sequences with motif6.78%
Average Position of motif in Targets48.5 +/- 25.8bp
Average Position of motif in Background49.1 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.1/Jaspar

Match Rank:1
Score:0.90
Offset:2
Orientation:reverse strand
Alignment:CGCTGATTGG-------
--CTGATTGGTCNATTT
 T G A C C A T G T A G C G A C T A T C G C G T A A G C T C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.89
Offset:2
Orientation:reverse strand
Alignment:CGCTGATTGG--
--CCGATTGGCT
 T G A C C A T G T A G C G A C T A T C G C G T A A G C T C G A T C T A G A T C G A C G T A C G T
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

NFYA/MA0060.2/Jaspar

Match Rank:3
Score:0.88
Offset:-4
Orientation:forward strand
Alignment:----CGCTGATTGG----
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T T G A C C A T G T A G C G A C T A T C G C G T A A G C T C G A T C T A G A T C G A C G T A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.80
Offset:3
Orientation:reverse strand
Alignment:CGCTGATTGG-----
---TGATTGGCTANN
 T G A C C A T G T A G C G A C T A T C G C G T A A G C T C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:CGCTGATTGG
--TTGATTGN
 T G A C C A T G T A G C G A C T A T C G C G T A A G C T C G A T C T A G A T C G
A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

Gfi1/MA0038.1/Jaspar

Match Rank:6
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CGCTGATTGG
CNGTGATTTN
 T G A C C A T G T A G C G A C T A T C G C G T A A G C T C G A T C T A G A T C G
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

PH0089.1_Isx/Jaspar

Match Rank:7
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CGCTGATTGG----
ACTCCTAATTAGTCGT
 A C G T A C G T T G A C C A T G T A G C G A C T A T C G C G T A A G C T C G A T C T A G A T C G A C G T A C G T A C G T A C G T
G C T A T G A C A G C T T G A C G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C G T A G T C T A C G C G A T

PH0098.1_Lhx8/Jaspar

Match Rank:8
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CGCTGATTGG----
CACCGCTAATTAGNNGN
 A C G T A C G T A C G T T G A C C A T G T A G C G A C T A T C G C G T A A G C T C G A T C T A G A T C G A C G T A C G T A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

PH0026.1_Duxbl/Jaspar

Match Rank:9
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CGCTGATTGG----
NNNNGTTGATTGGGTCG
 A C G T A C G T A C G T T G A C C A T G T A G C G A C T A T C G C G T A A G C T C G A T C T A G A T C G A C G T A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Lhx8/MA0705.1/Jaspar

Match Rank:10
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CGCTGATTGG
--CTAATTAG
 T G A C C A T G T A G C G A C T A T C G C G T A A G C T C G A T C T A G A T C G
A C G T A C G T A G T C A G C T T C G A C G T A A C G T A G C T C T G A T C A G