Information for 4-AGCHGGASCTKTT (Motif 6)

C G T A A C T G A T G C G T C A C T A G A C T G G T C A A T C G A T G C A G C T C A T G A C G T A C G T
Reverse Opposite:
G T C A C G T A G T A C C T G A A T C G T A G C A C G T A G T C A G T C C A G T A T C G A G T C C G A T
p-value:1e-14
log p-value:-3.295e+01
Information Content per bp:1.719
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.37%
Number of Background Sequences with motif73.8
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets47.2 +/- 26.4bp
Average Position of motif in Background53.2 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGCHGGASCTKTT
GRTGMTRGAGCC---
 A C G T A C G T C G T A A C T G A T G C G T C A C T A G A C T G G T C A A T C G A T G C A G C T C A T G A C G T A C G T
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGCHGGASCTKTT
ANCAGGATGT---
 C G T A A C T G A T G C G T C A C T A G A C T G G T C A A T C G A T G C A G C T C A T G A C G T A C G T
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T

Tcf21/MA0832.1/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGCHGGASCTKTT--
-GCAACAGCTGTTGT
 C G T A A C T G A T G C G T C A C T A G A C T G G T C A A T C G A T G C A G C T C A T G A C G T A C G T A C G T A C G T
A C G T T C A G G A T C C T G A G T C A A G T C G T C A A C T G A G T C A C G T A C T G A C G T G A C T T C A G A G C T

PROX1/MA0794.1/Jaspar

Match Rank:4
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AGCHGGASCTKTT-
--CAAGACGCCTTA
 C G T A A C T G A T G C G T C A C T A G A C T G G T C A A T C G A T G C A G C T C A T G A C G T A C G T A C G T
A C G T A C G T A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:5
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:AGCHGGASCTKTT--
-----BRRCVGTTDN
 C G T A A C T G A T G C G T C A C T A G A C T G G T C A A T C G A T G C A G C T C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----AGCHGGASCTKTT
DCHCAGCAGGRGGCC--
 A C G T A C G T A C G T A C G T C G T A A C T G A T G C G T C A C T A G A C T G G T C A A T C G A T G C A G C T C A T G A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

MSC/MA0665.1/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AGCHGGASCTKTT
---AACAGCTGTT
 C G T A A C T G A T G C G T C A C T A G A C T G G T C A A T C G A T G C A G C T C A T G A C G T A C G T
A C G T A C G T A C G T C T G A T G C A A T G C C G T A A T C G A T G C A C G T A C T G A G C T A G C T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AGCHGGASCTKTT
GAGSCCGAGC----
 A C G T C G T A A C T G A T G C G T C A C T A G A C T G G T C A A T C G A T G C A G C T C A T G A C G T A C G T
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.49
Offset:3
Orientation:forward strand
Alignment:AGCHGGASCTKTT--
---AGGVNCCTTTGT
 C G T A A C T G A T G C G T C A C T A G A C T G G T C A A T C G A T G C A G C T C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-AGCHGGASCTKTT
SDGCAGGTGCNS--
 A C G T C G T A A C T G A T G C G T C A C T A G A C T G G T C A A T C G A T G C A G C T C A T G A C G T A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T