p-value: | 1e-7 |
log p-value: | -1.766e+01 |
Information Content per bp: | 1.887 |
Number of Target Sequences with motif | 19.0 |
Percentage of Target Sequences with motif | 2.65% |
Number of Background Sequences with motif | 251.1 |
Percentage of Background Sequences with motif | 0.53% |
Average Position of motif in Targets | 46.4 +/- 18.9bp |
Average Position of motif in Background | 48.6 +/- 32.7bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0183.1_Sry_2/Jaspar
Match Rank: | 1 |
Score: | 0.79 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GCACAATAGG-- TCACGGAACAATAGGTG |
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PB0173.1_Sox21_2/Jaspar
Match Rank: | 2 |
Score: | 0.78 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----GCACAATAGG-- NNNNNGAACAATTGANN |
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PB0168.1_Sox14_2/Jaspar
Match Rank: | 3 |
Score: | 0.77 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCACAATAGG-- CTCACACAATGGCGC |
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Sox17/MA0078.1/Jaspar
Match Rank: | 4 |
Score: | 0.76 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCACAATAGG -GACAATGNN |
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PB0065.1_Sox15_1/Jaspar
Match Rank: | 5 |
Score: | 0.74 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GCACAATAGG--- TAGTGAACAATAGATTT |
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Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 6 |
Score: | 0.74 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCACAATAGG GAACAATGGN |
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SOX9/MA0077.1/Jaspar
Match Rank: | 7 |
Score: | 0.74 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCACAATAGG GAACAATGG- |
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PB0072.1_Sox5_1/Jaspar
Match Rank: | 8 |
Score: | 0.73 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GCACAATAGG-- TTTAGAACAATAAAAT |
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Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer
Match Rank: | 9 |
Score: | 0.72 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCACAATAGG RNAACAATGG- |
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PB0132.1_Hbp1_2/Jaspar
Match Rank: | 10 |
Score: | 0.72 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GCACAATAGG---- NNTNNACAATGGGANNN |
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