Information for 14-AGCCTCATTRTTTGRA (Motif 16)

T C G A C T A G A G T C G T A C C A G T A G T C T G C A C A G T G A C T T C G A C G A T G A C T A C G T C T A G T C G A G C T A
Reverse Opposite:
C G A T A G C T A G T C C G T A C G T A C G T A A G C T C T G A G T C A A C G T T C A G G T C A A C T G T C A G A G T C A C G T
p-value:1e-9
log p-value:-2.295e+01
Information Content per bp:1.643
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif23.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets53.3 +/- 27.8bp
Average Position of motif in Background36.9 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AGCCTCATTRTTTGRA
GCAACCTCATTATNNNN-
 A C G T A C G T T C G A C T A G A G T C G T A C C A G T A G T C T G C A C A G T G A C T T C G A C G A T G A C T A C G T C T A G T C G A G C T A
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGCCTCATTRTTTGRA
NNNACCTCATTATCNTN-
 A C G T A C G T T C G A C T A G A G T C G T A C C A G T A G T C T G C A C A G T G A C T T C G A C G A T G A C T A C G T C T A G T C G A G C T A
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AGCCTCATTRTTTGRA---
----CCATTGTATGCAAAT
 T C G A C T A G A G T C G T A C C A G T A G T C T G C A C A G T G A C T T C G A C G A T G A C T A C G T C T A G T C G A G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

POU6F2/MA0793.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGCCTCATTRTTTGRA
-AGCTCATTAT-----
 T C G A C T A G A G T C G T A C C A G T A G T C T G C A C A G T G A C T T C G A C G A T G A C T A C G T C T A G T C G A G C T A
A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGCCTCATTRTTTGRA
-NTNTTGTTGTTTGTN
 T C G A C T A G A G T C G T A C C A G T A G T C T G C A C A G T G A C T T C G A C G A T G A C T A C G T C T A G T C G A G C T A
A C G T G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.55
Offset:10
Orientation:reverse strand
Alignment:AGCCTCATTRTTTGRA----
----------TTTGAAACCG
 T C G A C T A G A G T C G T A C C A G T A G T C T G C A C A G T G A C T T C G A C G A T G A C T A C G T C T A G T C G A G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

LIN54/MA0619.1/Jaspar

Match Rank:7
Score:0.54
Offset:9
Orientation:forward strand
Alignment:AGCCTCATTRTTTGRA--
---------ATTTGAATT
 T C G A C T A G A G T C G T A C C A G T A G T C T G C A C A G T G A C T T C G A C G A T G A C T A C G T C T A G T C G A G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

Sox5/MA0087.1/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:forward strand
Alignment:AGCCTCATTRTTTGRA
------ATTGTTA---
 T C G A C T A G A G T C G T A C C A G T A G T C T G C A C A G T G A C T T C G A C G A T G A C T A C G T C T A G T C G A G C T A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:9
Score:0.53
Offset:8
Orientation:forward strand
Alignment:AGCCTCATTRTTTGRA--
--------TRTTTACTTW
 T C G A C T A G A G T C G T A C C A G T A G T C T G C A C A G T G A C T T C G A C G A T G A C T A C G T C T A G T C G A G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.53
Offset:8
Orientation:forward strand
Alignment:AGCCTCATTRTTTGRA-
--------TGTTTATTT
 T C G A C T A G A G T C G T A C C A G T A G T C T G C A C A G T G A C T T C G A C G A T G A C T A C G T C T A G T C G A G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T