Information for 12-GARCYCTGTGTACAAA (Motif 14)

C A T G C T G A T C A G G T A C G A T C A T G C A C G T A T C G C G A T A C T G C G A T C G T A A T G C G T C A G T C A T G C A
Reverse Opposite:
A C G T C A G T A C G T A T C G C G A T C G T A A G T C C G T A A T G C C G T A T A C G C T A G A C T G A G T C G A C T G A T C
p-value:1e-10
log p-value:-2.471e+01
Information Content per bp:1.715
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif12.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets53.8 +/- 18.7bp
Average Position of motif in Background58.6 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GARCYCTGTGTACAAA---
--TACATGTGCACATAAAA
 C A T G C T G A T C A G G T A C G A T C A T G C A C G T A T C G C G A T A C T G C G A T C G T A A T G C G T C A G T C A T G C A A C G T A C G T A C G T
A C G T A C G T C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GARCYCTGTGTACAAA-----
----NSTGTTTRCWCAGBNNN
 C A T G C T G A T C A G G T A C G A T C A T G C A C G T A T C G C G A T A C T G C G A T C G T A A T G C G T C A G T C A T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GARCYCTGTGTACAAA---
--CAGATGTGCACATACGT
 C A T G C T G A T C A G G T A C G A T C A T G C A C G T A T C G C G A T A C T G C G A T C G T A A T G C G T C A G T C A T G C A A C G T A C G T A C G T
A C G T A C G T G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GARCYCTGTGTACAAA
VAGRACAKWCTGTYC---
 A C G T A C G T C A T G C T G A T C A G G T A C G A T C A T G C A C G T A T C G C G A T A C T G C G A T C G T A A T G C G T C A G T C A T G C A
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GARCYCTGTGTACAAA
----CNTGTTTACATA
 C A T G C T G A T C A G G T A C G A T C A T G C A C G T A T C G C G A T A C T G C G A T C G T A A T G C G T C A G T C A T G C A
A C G T A C G T A C G T A C G T A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

NR3C2/MA0727.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GARCYCTGTGTACAAA
GGGAACATTGTGTTCCC-
 A C G T A C G T C A T G C T G A T C A G G T A C G A T C A T G C A C G T A T C G C G A T A C T G C G A T C G T A A T G C G T C A G T C A T G C A
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C A C G T

MTF1/MA0863.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GARCYCTGTGTACAAA
GTGCCGTGTGCAAA--
 C A T G C T G A T C A G G T A C G A T C A T G C A C G T A T C G C G A T A C T G C G A T C G T A A T G C G T C A G T C A T G C A
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A A C G T A C G T

Ar/MA0007.3/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GARCYCTGTGTACAAA
GGGAACACGGTGTACCC-
 A C G T A C G T C A T G C T G A T C A G G T A C G A T C A T G C A C G T A T C G C G A T A C T G C G A T C G T A A T G C G T C A G T C A T G C A
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C A C G T

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GARCYCTGTGTACAAA
---NYYTGTTTACHN-
 C A T G C T G A T C A G G T A C G A T C A T G C A C G T A T C G C G A T A C T G C G A T C G T A A T G C G T C A G T C A T G C A
A C G T A C G T A C G T A G C T A G T C A G T C A C G T C T A G A C G T A C G T A C G T C G T A A G T C G A T C C G T A A C G T

NR3C1/MA0113.3/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GARCYCTGTGTACAAA
NGGAACATNATGTACCC-
 A C G T A C G T C A T G C T G A T C A G G T A C G A T C A T G C A C G T A T C G C G A T A C T G C G A T C G T A A T G C G T C A G T C A T G C A
C A T G C T A G C T A G C G T A T G C A T A G C C T G A G A C T G C A T C T G A G A C T A T C G G C A T G C T A G A T C G A T C G A T C A C G T