Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-53 | -1.223e+02 | 0.0000 | 237.0 | 34.30% | 5623.3 | 11.80% | motif file (matrix) |
svg |
2 |
| Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer | 1e-52 | -1.209e+02 | 0.0000 | 152.0 | 22.00% | 2404.4 | 5.05% | motif file (matrix) |
svg |
3 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-47 | -1.105e+02 | 0.0000 | 177.0 | 25.62% | 3521.4 | 7.39% | motif file (matrix) |
svg |
4 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-46 | -1.077e+02 | 0.0000 | 118.0 | 17.08% | 1592.3 | 3.34% | motif file (matrix) |
svg |
5 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-46 | -1.064e+02 | 0.0000 | 173.0 | 25.04% | 3475.8 | 7.29% | motif file (matrix) |
svg |
6 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-45 | -1.057e+02 | 0.0000 | 141.0 | 20.41% | 2347.9 | 4.93% | motif file (matrix) |
svg |
7 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-42 | -9.827e+01 | 0.0000 | 120.0 | 17.37% | 1816.6 | 3.81% | motif file (matrix) |
svg |
8 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-42 | -9.700e+01 | 0.0000 | 127.0 | 18.38% | 2064.6 | 4.33% | motif file (matrix) |
svg |
9 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-40 | -9.353e+01 | 0.0000 | 121.0 | 17.51% | 1939.7 | 4.07% | motif file (matrix) |
svg |
10 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-39 | -9.088e+01 | 0.0000 | 131.0 | 18.96% | 2330.2 | 4.89% | motif file (matrix) |
svg |
11 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-39 | -9.009e+01 | 0.0000 | 273.0 | 39.51% | 8597.2 | 18.04% | motif file (matrix) |
svg |
12 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-38 | -8.960e+01 | 0.0000 | 67.0 | 9.70% | 545.9 | 1.15% | motif file (matrix) |
svg |
13 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-35 | -8.264e+01 | 0.0000 | 100.0 | 14.47% | 1488.7 | 3.12% | motif file (matrix) |
svg |
14 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-33 | -7.617e+01 | 0.0000 | 91.0 | 13.17% | 1333.7 | 2.80% | motif file (matrix) |
svg |
15 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-28 | -6.525e+01 | 0.0000 | 105.0 | 15.20% | 2032.8 | 4.27% | motif file (matrix) |
svg |
16 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-24 | -5.558e+01 | 0.0000 | 102.0 | 14.76% | 2187.1 | 4.59% | motif file (matrix) |
svg |
17 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-23 | -5.351e+01 | 0.0000 | 85.0 | 12.30% | 1620.5 | 3.40% | motif file (matrix) |
svg |
18 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-22 | -5.141e+01 | 0.0000 | 79.0 | 11.43% | 1463.7 | 3.07% | motif file (matrix) |
svg |
19 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-22 | -5.136e+01 | 0.0000 | 84.0 | 12.16% | 1640.8 | 3.44% | motif file (matrix) |
svg |
20 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-19 | -4.502e+01 | 0.0000 | 81.0 | 11.72% | 1705.3 | 3.58% | motif file (matrix) |
svg |
21 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-19 | -4.382e+01 | 0.0000 | 85.0 | 12.30% | 1894.0 | 3.97% | motif file (matrix) |
svg |
22 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-18 | -4.314e+01 | 0.0000 | 58.0 | 8.39% | 953.8 | 2.00% | motif file (matrix) |
svg |
23 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-18 | -4.245e+01 | 0.0000 | 20.0 | 2.89% | 73.7 | 0.15% | motif file (matrix) |
svg |
24 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-17 | -4.003e+01 | 0.0000 | 21.0 | 3.04% | 96.5 | 0.20% | motif file (matrix) |
svg |
25 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-17 | -3.948e+01 | 0.0000 | 86.0 | 12.45% | 2077.1 | 4.36% | motif file (matrix) |
svg |
26 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-16 | -3.875e+01 | 0.0000 | 69.0 | 9.99% | 1441.7 | 3.03% | motif file (matrix) |
svg |
27 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-16 | -3.825e+01 | 0.0000 | 141.0 | 20.41% | 4619.9 | 9.70% | motif file (matrix) |
svg |
28 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-16 | -3.786e+01 | 0.0000 | 66.0 | 9.55% | 1356.1 | 2.85% | motif file (matrix) |
svg |
29 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-15 | -3.641e+01 | 0.0000 | 114.0 | 16.50% | 3426.6 | 7.19% | motif file (matrix) |
svg |
30 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-15 | -3.467e+01 | 0.0000 | 122.0 | 17.66% | 3893.8 | 8.17% | motif file (matrix) |
svg |
31 |
| GFY(?)/Promoter/Homer | 1e-14 | -3.339e+01 | 0.0000 | 21.0 | 3.04% | 135.8 | 0.29% | motif file (matrix) |
svg |
32 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-13 | -3.149e+01 | 0.0000 | 111.0 | 16.06% | 3538.0 | 7.43% | motif file (matrix) |
svg |
33 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-13 | -3.125e+01 | 0.0000 | 70.0 | 10.13% | 1723.4 | 3.62% | motif file (matrix) |
svg |
34 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-12 | -2.870e+01 | 0.0000 | 66.0 | 9.55% | 1654.3 | 3.47% | motif file (matrix) |
svg |
35 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-11 | -2.755e+01 | 0.0000 | 58.0 | 8.39% | 1374.0 | 2.88% | motif file (matrix) |
svg |
36 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-11 | -2.587e+01 | 0.0000 | 89.0 | 12.88% | 2799.5 | 5.88% | motif file (matrix) |
svg |
37 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-10 | -2.520e+01 | 0.0000 | 45.0 | 6.51% | 951.2 | 2.00% | motif file (matrix) |
svg |
38 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-10 | -2.457e+01 | 0.0000 | 63.0 | 9.12% | 1692.7 | 3.55% | motif file (matrix) |
svg |
39 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-9 | -2.258e+01 | 0.0000 | 51.0 | 7.38% | 1271.1 | 2.67% | motif file (matrix) |
svg |
40 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-8 | -1.968e+01 | 0.0000 | 141.0 | 20.41% | 5940.0 | 12.47% | motif file (matrix) |
svg |
41 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-8 | -1.902e+01 | 0.0000 | 59.0 | 8.54% | 1770.9 | 3.72% | motif file (matrix) |
svg |
42 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-7 | -1.758e+01 | 0.0000 | 26.0 | 3.76% | 484.1 | 1.02% | motif file (matrix) |
svg |
43 |
| Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer | 1e-7 | -1.709e+01 | 0.0000 | 27.0 | 3.91% | 531.0 | 1.11% | motif file (matrix) |
svg |
44 |
| GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer | 1e-7 | -1.647e+01 | 0.0000 | 16.0 | 2.32% | 200.4 | 0.42% | motif file (matrix) |
svg |
45 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-7 | -1.616e+01 | 0.0000 | 45.0 | 6.51% | 1284.0 | 2.69% | motif file (matrix) |
svg |
46 |
| ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer | 1e-6 | -1.611e+01 | 0.0000 | 27.0 | 3.91% | 558.1 | 1.17% | motif file (matrix) |
svg |
47 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-6 | -1.601e+01 | 0.0000 | 175.0 | 25.33% | 8295.5 | 17.41% | motif file (matrix) |
svg |
48 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-6 | -1.590e+01 | 0.0000 | 71.0 | 10.27% | 2525.1 | 5.30% | motif file (matrix) |
svg |
49 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-6 | -1.559e+01 | 0.0000 | 73.0 | 10.56% | 2647.7 | 5.56% | motif file (matrix) |
svg |
50 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-6 | -1.554e+01 | 0.0000 | 145.0 | 20.98% | 6588.0 | 13.83% | motif file (matrix) |
svg |
51 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-6 | -1.523e+01 | 0.0000 | 98.0 | 14.18% | 3983.7 | 8.36% | motif file (matrix) |
svg |
52 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-6 | -1.476e+01 | 0.0000 | 31.0 | 4.49% | 754.3 | 1.58% | motif file (matrix) |
svg |
53 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-6 | -1.464e+01 | 0.0000 | 215.0 | 31.11% | 10914.1 | 22.91% | motif file (matrix) |
svg |
54 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-6 | -1.460e+01 | 0.0000 | 40.0 | 5.79% | 1137.4 | 2.39% | motif file (matrix) |
svg |
55 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-6 | -1.438e+01 | 0.0000 | 100.0 | 14.47% | 4169.3 | 8.75% | motif file (matrix) |
svg |
56 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-5 | -1.312e+01 | 0.0000 | 34.0 | 4.92% | 944.9 | 1.98% | motif file (matrix) |
svg |
57 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-5 | -1.226e+01 | 0.0000 | 32.0 | 4.63% | 896.7 | 1.88% | motif file (matrix) |
svg |
58 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-5 | -1.212e+01 | 0.0000 | 36.0 | 5.21% | 1079.1 | 2.26% | motif file (matrix) |
svg |
59 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-4 | -1.127e+01 | 0.0001 | 154.0 | 22.29% | 7659.8 | 16.08% | motif file (matrix) |
svg |
60 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-4 | -1.113e+01 | 0.0001 | 18.0 | 2.60% | 376.0 | 0.79% | motif file (matrix) |
svg |
61 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-4 | -1.111e+01 | 0.0001 | 217.0 | 31.40% | 11594.6 | 24.33% | motif file (matrix) |
svg |
62 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.110e+01 | 0.0001 | 17.0 | 2.46% | 340.7 | 0.71% | motif file (matrix) |
svg |
63 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-4 | -1.049e+01 | 0.0002 | 16.0 | 2.32% | 321.3 | 0.67% | motif file (matrix) |
svg |
64 |
| Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer | 1e-4 | -1.049e+01 | 0.0002 | 16.0 | 2.32% | 321.2 | 0.67% | motif file (matrix) |
svg |
65 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-3 | -9.079e+00 | 0.0006 | 23.0 | 3.33% | 650.8 | 1.37% | motif file (matrix) |
svg |
66 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-3 | -8.806e+00 | 0.0008 | 16.0 | 2.32% | 372.1 | 0.78% | motif file (matrix) |
svg |
67 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-3 | -8.156e+00 | 0.0016 | 62.0 | 8.97% | 2695.8 | 5.66% | motif file (matrix) |
svg |
68 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-3 | -7.946e+00 | 0.0019 | 102.0 | 14.76% | 5024.3 | 10.54% | motif file (matrix) |
svg |
69 |
| E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.717e+00 | 0.0023 | 30.0 | 4.34% | 1049.4 | 2.20% | motif file (matrix) |
svg |
70 |
| Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer | 1e-3 | -7.055e+00 | 0.0045 | 10.0 | 1.45% | 201.1 | 0.42% | motif file (matrix) |
svg |
71 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-3 | -6.970e+00 | 0.0048 | 11.0 | 1.59% | 240.4 | 0.50% | motif file (matrix) |
svg |
72 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -6.760e+00 | 0.0059 | 80.0 | 11.58% | 3894.6 | 8.17% | motif file (matrix) |
svg |
73 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-2 | -6.632e+00 | 0.0066 | 47.0 | 6.80% | 2027.0 | 4.25% | motif file (matrix) |
svg |
74 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.109e+00 | 0.0109 | 32.0 | 4.63% | 1270.6 | 2.67% | motif file (matrix) |
svg |
75 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-2 | -5.906e+00 | 0.0132 | 47.0 | 6.80% | 2105.4 | 4.42% | motif file (matrix) |
svg |
76 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.886e+00 | 0.0133 | 8.0 | 1.16% | 161.3 | 0.34% | motif file (matrix) |
svg |
77 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.838e+00 | 0.0138 | 29.0 | 4.20% | 1136.9 | 2.39% | motif file (matrix) |
svg |
78 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -5.701e+00 | 0.0156 | 67.0 | 9.70% | 3281.1 | 6.89% | motif file (matrix) |
svg |
79 |
| Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-2 | -5.619e+00 | 0.0167 | 66.0 | 9.55% | 3234.5 | 6.79% | motif file (matrix) |
svg |
80 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-2 | -5.561e+00 | 0.0175 | 23.0 | 3.33% | 850.9 | 1.79% | motif file (matrix) |
svg |
81 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-2 | -5.521e+00 | 0.0180 | 41.0 | 5.93% | 1813.5 | 3.81% | motif file (matrix) |
svg |
82 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-2 | -5.518e+00 | 0.0180 | 221.0 | 31.98% | 13033.4 | 27.35% | motif file (matrix) |
svg |
83 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-2 | -5.514e+00 | 0.0180 | 79.0 | 11.43% | 4023.4 | 8.44% | motif file (matrix) |
svg |
84 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.480e+00 | 0.0181 | 51.0 | 7.38% | 2382.1 | 5.00% | motif file (matrix) |
svg |
85 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-2 | -5.276e+00 | 0.0219 | 51.0 | 7.38% | 2408.1 | 5.05% | motif file (matrix) |
svg |
86 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-2 | -5.131e+00 | 0.0250 | 64.0 | 9.26% | 3188.5 | 6.69% | motif file (matrix) |
svg |
87 |
| IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer | 1e-2 | -5.041e+00 | 0.0271 | 8.0 | 1.16% | 186.2 | 0.39% | motif file (matrix) |
svg |
88 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -4.972e+00 | 0.0287 | 75.0 | 10.85% | 3872.9 | 8.13% | motif file (matrix) |
svg |
89 |
| bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer | 1e-2 | -4.859e+00 | 0.0317 | 18.0 | 2.60% | 649.7 | 1.36% | motif file (matrix) |
svg |
90 |
| Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer | 1e-2 | -4.757e+00 | 0.0348 | 14.0 | 2.03% | 461.6 | 0.97% | motif file (matrix) |
svg |
91 |
| E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer | 1e-2 | -4.664e+00 | 0.0377 | 31.0 | 4.49% | 1351.1 | 2.84% | motif file (matrix) |
svg |
92 |
| ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -4.652e+00 | 0.0378 | 2.0 | 0.29% | 10.3 | 0.02% | motif file (matrix) |
svg |