Information for 8-GGTGACAGAC (Motif 8)

C T A G A C T G A C G T A T C G C G T A A G T C C G T A A T C G C G T A G A T C
Reverse Opposite:
C T A G A C G T A T G C A C G T A C T G G C A T A T G C C G T A A G T C A G T C
p-value:1e-16
log p-value:-3.789e+01
Information Content per bp:1.862
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.18%
Number of Background Sequences with motif122.3
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets52.7 +/- 18.2bp
Average Position of motif in Background47.1 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-GGTGACAGAC-
AGGTGHCAGACA
 A C G T C T A G A C T G A C G T A T C G C G T A A G T C C G T A A T C G C G T A G A T C A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-GGTGACAGAC--
AGGTGNCAGACAG
 A C G T C T A G A C T G A C G T A T C G C G T A A G T C C G T A A T C G C G T A G A T C A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GGTGACAGAC
VBTGWCAGCB
 C T A G A C T G A C G T A T C G C G T A A G T C C G T A A T C G C G T A G A T C
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGTGACAGAC
AGGTGTCA---
 A C G T C T A G A C T G A C G T A T C G C G T A A G T C C G T A A T C G C G T A G A T C
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGACAGAC--
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C G T A T C G C G T A A G T C C G T A A T C G C G T A G A T C A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGTGACAGAC
RHTGWCAR--
 C T A G A C T G A C G T A T C G C G T A A G T C C G T A A T C G C G T A G A T C
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGTGACAGAC
ARNTGACA---
 A C G T C T A G A C T G A C G T A T C G C G T A A G T C C G T A A T C G C G T A G A T C
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGTGACAGAC
-TTGACAGG-
 C T A G A C T G A C G T A T C G C G T A A G T C C G T A A T C G C G T A G A T C
A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:9
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GGTGACAGAC
GGTGYTGACAGS-
 A C G T A C G T A C G T C T A G A C T G A C G T A T C G C G T A A G T C C G T A A T C G C G T A G A T C
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGTGACAGAC
-TTGACAGC-
 C T A G A C T G A C G T A T C G C G T A A G T C C G T A A T C G C G T A G A T C
A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T