Information for 2-GWGTAAACAR (Motif 2)

T C A G C G A T A C T G A G C T G T C A C G T A C G T A A G T C C G T A C T A G
Reverse Opposite:
G A T C A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A A G T C
p-value:1e-51
log p-value:-1.176e+02
Information Content per bp:1.731
Number of Target Sequences with motif134.0
Percentage of Target Sequences with motif19.39%
Number of Background Sequences with motif1900.1
Percentage of Background Sequences with motif3.99%
Average Position of motif in Targets46.6 +/- 22.7bp
Average Position of motif in Background49.5 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:1
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-GWGTAAACAR-
TATGTAAACANG
 A C G T T C A G C G A T A C T G A G C T G T C A C G T A C G T A A G T C C G T A C T A G A C G T
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:2
Score:0.93
Offset:-3
Orientation:reverse strand
Alignment:---GWGTAAACAR--
NCWRWGTAAACANSV
 A C G T A C G T A C G T T C A G C G A T A C T G A G C T G T C A C G T A C G T A A G T C C G T A C T A G A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

FOXA1/MA0148.3/Jaspar

Match Rank:3
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--GWGTAAACAR---
CAAAGTAAACANNNN
 A C G T A C G T T C A G C G A T A C T G A G C T G T C A C G T A C G T A A G T C C G T A C T A G A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxa2/MA0047.2/Jaspar

Match Rank:4
Score:0.91
Offset:-3
Orientation:reverse strand
Alignment:---GWGTAAACAR
NCTAAGTAAACA-
 A C G T A C G T A C G T T C A G C G A T A C T G A G C T G T C A C G T A C G T A A G T C C G T A C T A G
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-GWGTAAACAR
AAAGTAAACA-
 A C G T T C A G C G A T A C T G A G C T G T C A C G T A C G T A A G T C C G T A C T A G
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:6
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-GWGTAAACAR
WAAGTAAAYA-
 A C G T T C A G C G A T A C T G A G C T G T C A C G T A C G T A A G T C C G T A C T A G
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T

FOXI1/MA0042.2/Jaspar

Match Rank:7
Score:0.91
Offset:2
Orientation:forward strand
Alignment:GWGTAAACAR
--GTAAACA-
 T C A G C G A T A C T G A G C T G T C A C G T A C G T A A G T C C G T A C T A G
A C G T A C G T T C A G G C A T T G C A G T C A C G T A G A T C T C G A A C G T

FOXO4/MA0848.1/Jaspar

Match Rank:8
Score:0.91
Offset:2
Orientation:forward strand
Alignment:GWGTAAACAR
--GTAAACA-
 T C A G C G A T A C T G A G C T G T C A C G T A C G T A A G T C C G T A C T A G
A C G T A C G T T C A G C G A T T G C A G T C A C T G A G A T C C G T A A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:9
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-GWGTAAACAR
AAAGTAAACA-
 A C G T T C A G C G A T A C T G A G C T G T C A C G T A C G T A A G T C C G T A C T A G
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXD2/MA0847.1/Jaspar

Match Rank:10
Score:0.91
Offset:2
Orientation:forward strand
Alignment:GWGTAAACAR
--GTAAACA-
 T C A G C G A T A C T G A G C T G T C A C G T A C G T A A G T C C G T A C T A G
A C G T A C G T T C A G G A C T G T C A G T C A C G T A A G T C C T G A A C G T