Information for 16-TTGTCATGACMAGCAG (Motif 15)

A G C T A C G T C A T G G A C T A T G C G C T A C G A T T C A G T C G A A G T C G T A C C G T A A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T C T A G T G A C A C G T A C T G A C T G A G C T A G T C C G T A C G A T T A C G C G T A G A T C C G T A C T G A
p-value:1e-12
log p-value:-2.787e+01
Information Content per bp:1.747
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.7 +/- 28.7bp
Average Position of motif in Background36.7 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTGTCATGACMAGCAG
GGTTGCCATGGCAA----
 A C G T A C G T A G C T A C G T C A T G G A C T A T G C G C T A C G A T T C A G T C G A A G T C G T A C C G T A A C T G A G T C C G T A A C T G
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTGTCATGACMAGCAG
NGTTGCCATGGCAA----
 A C G T A C G T A G C T A C G T C A T G G A C T A T G C G C T A C G A T T C A G T C G A A G T C G T A C C G T A A C T G A G T C C G T A A C T G
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T A C G T A C G T A C G T

RFX2/MA0600.2/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTGTCATGACMAGCAG
CGTTGCCATGGCAACG--
 A C G T A C G T A G C T A C G T C A T G G A C T A T G C G C T A C G A T T C A G T C G A A G T C G T A C C G T A A C T G A G T C C G T A A C T G
A T G C C T A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A A G T C T A C G A C G T A C G T

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTGTCATGACMAGCAG
GTTGCCATGGCAACM--
 A C G T A G C T A C G T C A T G G A C T A T G C G C T A C G A T T C A G T C G A A G T C G T A C C G T A A C T G A G T C C G T A A C T G
C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C T G A C A C G T A C G T

RFX5/MA0510.2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TTGTCATGACMAGCAG
CGTTGCCATGGCAACG--
 A C G T A C G T A G C T A C G T C A T G G A C T A T G C G C T A C G A T T C A G T C G A A G T C G T A C C G T A A C T G A G T C C G T A A C T G
A T G C C T A G A G C T G A C T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C T G A T G C A G A T C T A C G A C G T A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTGTCATGACMAGCAG
GTTGCCATGGCAACCG-
 A C G T A G C T A C G T C A T G G A C T A T G C G C T A C G A T T C A G T C G A A G T C G T A C C G T A A C T G A G T C C G T A A C T G
C T A G A G C T G A C T C T A G A G T C A G T C G T C A C G A T T C A G T C A G G A T C C T G A T C G A G A T C T A G C T C A G A C G T

RFX3/MA0798.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTGTCATGACMAGCAG
CGTTGCCATGGCAACN--
 A C G T A C G T A G C T A C G T C A T G G A C T A T G C G C T A C G A T T C A G T C G A A G T C G T A C C G T A A C T G A G T C C G T A A C T G
A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A G A T C T A C G A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TTGTCATGACMAGCAG-
-TGCCAAAATAAACANN
 A G C T A C G T C A T G G A C T A T G C G C T A C G A T T C A G T C G A A G T C G T A C C G T A A C T G A G T C C G T A A C T G A C G T
A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

RFX4/MA0799.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TTGTCATGACMAGCAG
CGTTGCCATGGCAACN--
 A C G T A C G T A G C T A C G T C A T G G A C T A T G C G C T A C G A T T C A G T C G A A G T C G T A C C G T A A C T G A G T C C G T A A C T G
A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C G T A G A T C T A C G A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TTGTCATGACMAGCAG
CTTTGTTATGCAAAT---
 A C G T A C G T A G C T A C G T C A T G G A C T A T G C G C T A C G A T T C A G T C G A A G T C G T A C C G T A A C T G A G T C C G T A A C T G
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T A C G T A C G T A C G T