Information for 15-GGAGAAATTAATGGCA (Motif 14)

A C T G A T C G C G T A C T A G T C G A G T C A C G T A C G A T A G C T T C G A C G T A C G A T C A T G A C T G A G T C C G T A
Reverse Opposite:
C G A T A C T G G T A C G T A C C G T A C G A T A C G T C T G A G C T A A C G T A C G T A G C T A G T C A C G T A T G C A G T C
p-value:1e-12
log p-value:-2.787e+01
Information Content per bp:1.738
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.2 +/- 22.2bp
Average Position of motif in Background54.0 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0055.1_Hoxa7_2/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGAGAAATTAATGGCA
GTAGTAATTAATGGAA
 A C T G A T C G C G T A C T A G T C G A G T C A C G T A C G A T A G C T T C G A C G T A C G A T C A T G A C T G A G T C C G T A
A C T G A C G T T G C A A C T G G C A T G T C A C G T A A C G T C A G T C G T A T G C A A C G T T C A G A T C G G T C A T G C A

Hoxd8/MA0910.1/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGAGAAATTAATGGCA-
TAAATAATTAATGGCTA
 A C T G A T C G C G T A C T A G T C G A G T C A C G T A C G A T A G C T T C G A C G T A C G A T C A T G A C T G A G T C C G T A A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PH0080.1_Hoxd8/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGAGAAATTAATGGCA-
TAAATAATTAATGGCTA
 A C T G A T C G C G T A C T A G T C G A G T C A C G T A C G A T A G C T T C G A C G T A C G A T C A T G A C T G A G T C C G T A A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PH0062.1_Hoxb7/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGAGAAATTAATGGCA
GTAGTAATTAATGCAA
 A C T G A T C G C G T A C T A G T C G A G T C A C G T A C G A T A G C T T C G A C G T A C G A T C A T G A C T G A G T C C G T A
A T C G A G C T T G C A A C T G G A C T G T C A G C T A C G A T C A G T C T G A T G C A A C G T C A T G A T G C G C T A C T G A

PH0119.1_Nkx6-1_2/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGAGAAATTAATGGCA
GANGTAATTAATTANN
 A C T G A T C G C G T A C T A G T C G A G T C A C G T A C G A T A G C T T C G A C G T A C G A T C A T G A C T G A G T C C G T A
T C A G C T G A T G C A T C A G G A C T T G C A C G T A C G A T G A C T C T G A G C T A C G A T C G A T C T G A A G T C A G C T

PH0019.1_Dbx2/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGAGAAATTAATGGCA
NAATTAATTAATTNNN
 A C T G A T C G C G T A C T A G T C G A G T C A C G T A C G A T A G C T T C G A C G T A C G A T C A T G A C T G A G T C C G T A
C A T G C G T A T G C A G C A T G A C T G T C A G C T A G A C T G C A T C T G A C G T A G C A T C A G T C T G A G T C A T C G A

PH0106.1_Msx1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGAGAAATTAATGGCA
NNATTAATTAGTNGNN
 A C T G A T C G C G T A C T A G T C G A G T C A C G T A C G A T A G C T T C G A C G T A C G A T C A T G A C T G A G T C C G T A
C A T G C G T A T G C A G A C T G A C T C G T A C G T A A C G T A C G T C T G A C T A G G A C T C G A T C A T G A G T C T G C A

Hmx1/MA0896.1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGAGAAATTAATGGCA
ACAAGCAATTAATGAAT
 A C G T A C T G A T C G C G T A C T A G T C G A G T C A C G T A C G A T A G C T T C G A C G T A C G A T C A T G A C T G A G T C C G T A
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGAGAAATTAATGGCA
ACAAGCAATTAATGAAT
 A C G T A C T G A T C G C G T A C T A G T C G A G T C A C G T A C G A T A G C T T C G A C G T A C G A T C A T G A C T G A G T C C G T A
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GGAGAAATTAATGGCA
NACAGGAAAT-------
 A C G T A C T G A T C G C G T A C T A G T C G A G T C A C G T A C G A T A G C T T C G A C G T A C G A T C A T G A C T G A G T C C G T A
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T