Information for 11-ACCCATTGTT (Motif 11)

G C T A A G T C G T A C G T A C G T C A C G A T A C G T A C T G C G A T A C G T
Reverse Opposite:
G T C A C G T A A G T C C G T A C G T A C A G T C A T G A C T G T C A G C G A T
p-value:1e-14
log p-value:-3.303e+01
Information Content per bp:1.835
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.60%
Number of Background Sequences with motif90.8
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets58.7 +/- 24.6bp
Average Position of motif in Background52.1 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.88
Offset:1
Orientation:forward strand
Alignment:ACCCATTGTT-
-NCCATTGTTC
 G C T A A G T C G T A C G T A C G T C A C G A T A C G T A C T G C G A T A C G T A C G T
A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.87
Offset:2
Orientation:forward strand
Alignment:ACCCATTGTT--
--CCATTGTTYB
 G C T A A G T C G T A C G T A C G T C A C G A T A C G T A C T G C G A T A C G T A C G T A C G T
A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

SOX9/MA0077.1/Jaspar

Match Rank:3
Score:0.87
Offset:2
Orientation:forward strand
Alignment:ACCCATTGTT-
--CCATTGTTC
 G C T A A G T C G T A C G T A C G T C A C G A T A C G T A C T G C G A T A C G T A C G T
A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.84
Offset:2
Orientation:forward strand
Alignment:ACCCATTGTT
--CCTTTGTT
 G C T A A G T C G T A C G T A C G T C A C G A T A C G T A C T G C G A T A C G T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:ACCCATTGTT-
-NCCATTGTTY
 G C T A A G T C G T A C G T A C G T C A C G A T A C G T A C T G C G A T A C G T A C G T
A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.82
Offset:2
Orientation:forward strand
Alignment:ACCCATTGTT
--CCWTTGTY
 G C T A A G T C G T A C G T A C G T C A C G A T A C G T A C T G C G A T A C G T
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.81
Offset:2
Orientation:forward strand
Alignment:ACCCATTGTT--
--CCATTGTTNY
 G C T A A G T C G T A C G T A C G T C A C G A T A C G T A C T G C G A T A C G T A C G T A C G T
A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

PB0183.1_Sry_2/Jaspar

Match Rank:8
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-ACCCATTGTT------
CNNNTATTGTTCNNNNN
 A C G T G C T A A G T C G T A C G T A C G T C A C G A T A C G T A C T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.80
Offset:2
Orientation:forward strand
Alignment:ACCCATTGTT--
--CCATTGTTTT
 G C T A A G T C G T A C G T A C G T C A C G A T A C G T A C T G C G A T A C G T A C G T A C G T
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

PB0070.1_Sox30_1/Jaspar

Match Rank:10
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--ACCCATTGTT----
ANNTCCATTGTTCNNN
 A C G T A C G T G C T A A G T C G T A C G T A C G T C A C G A T A C G T A C T G C G A T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T