Information for 1-TTAACACCTY (Motif 1)

C A G T G A C T T G C A C T G A G T A C C G T A T A G C G A T C G A C T G A T C
Reverse Opposite:
C T A G C T G A C T A G A T C G C G A T A C T G G A C T A C G T C T G A G T C A
p-value:1e-76
log p-value:-1.751e+02
Information Content per bp:1.631
Number of Target Sequences with motif255.0
Percentage of Target Sequences with motif36.90%
Number of Background Sequences with motif4912.5
Percentage of Background Sequences with motif10.31%
Average Position of motif in Targets52.4 +/- 22.6bp
Average Position of motif in Background49.6 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-TTAACACCTY
ATTAACACCT-
 A C G T C A G T G A C T T G C A C T G A G T A C C G T A T A G C G A T C G A C T G A T C
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:2
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:TTAACACCTY
TTMACACCTT
 C A G T G A C T T G C A C T G A G T A C C G T A T A G C G A T C G A C T G A T C
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

TBX2/MA0688.1/Jaspar

Match Rank:3
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-TTAACACCTY
TTTCACACCTN
 A C G T C A G T G A C T T G C A C T G A G T A C C G T A T A G C G A T C G A C T G A T C
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:4
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-TTAACACCTY
KTTCACACCT-
 A C G T C A G T G A C T T G C A C T G A G T A C C G T A T A G C G A T C G A C T G A T C
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-TTAACACCTY
TTTCACACCT-
 A C G T C A G T G A C T T G C A C T G A G T A C C G T A T A G C G A T C G A C T G A T C
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:TTAACACCTY
-TGACACCT-
 C A G T G A C T T G C A C T G A G T A C C G T A T A G C G A T C G A C T G A T C
A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:7
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:TTAACACCTY
-TCACACCT-
 C A G T G A C T T G C A C T G A G T A C C G T A T A G C G A T C G A C T G A T C
A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:8
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:TTAACACCTY
TTCACACCTT
 C A G T G A C T T G C A C T G A G T A C C G T A T A G C G A T C G A C T G A T C
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

EOMES/MA0800.1/Jaspar

Match Rank:9
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---TTAACACCTY
NTTTTCACACCTT
 A C G T A C G T A C G T C A G T G A C T T G C A C T G A G T A C C G T A T A G C G A T C G A C T G A T C
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

TBX5/MA0807.1/Jaspar

Match Rank:10
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:TTAACACCTY
-TCACACCT-
 C A G T G A C T T G C A C T G A G T A C C G T A T A G C G A T C G A C T G A T C
A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T