Information for 5-TGCTGCCCCACTGTGG (Motif 7)

C G A T A T C G A T G C G A C T A C T G G T A C T A G C A G T C G T A C C G T A A G T C C A G T A C T G A C G T A T C G A C T G
Reverse Opposite:
T G A C A T G C C G T A G T A C G T C A A C T G G C A T C A T G C T A G A C T G A C T G T A G C C G T A A T C G T A G C G C T A
p-value:1e-10
log p-value:-2.518e+01
Information Content per bp:1.700
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif15.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets41.9 +/- 23.4bp
Average Position of motif in Background50.9 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:TGCTGCCCCACTGTGG----
--------NNHTGTGGTTWN
 C G A T A T C G A T G C G A C T A C T G G T A C T A G C A G T C G T A C C G T A A G T C C A G T A C T G A C G T A T C G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.58
Offset:8
Orientation:forward strand
Alignment:TGCTGCCCCACTGTGG---
--------GTCTGTGGTTT
 C G A T A T C G A T G C G A C T A C T G G T A C T A G C A G T C G T A C C G T A A G T C C A G T A C T G A C G T A T C G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.57
Offset:9
Orientation:forward strand
Alignment:TGCTGCCCCACTGTGG---
---------GCTGTGGTTT
 C G A T A T C G A T G C G A C T A C T G G T A C T A G C A G T C G T A C C G T A A G T C C A G T A C T G A C G T A T C G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGCTGCCCCACTGTGG
---CCCCCTGCTGTG-
 C G A T A T C G A T G C G A C T A C T G G T A C T A G C A G T C G T A C C G T A A G T C C A G T A C T G A C G T A T C G A C T G
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.57
Offset:9
Orientation:forward strand
Alignment:TGCTGCCCCACTGTGG
---------GCTGTG-
 C G A T A T C G A T G C G A C T A C T G G T A C T A G C A G T C G T A C C G T A A G T C C A G T A C T G A C G T A T C G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.56
Offset:10
Orientation:reverse strand
Alignment:TGCTGCCCCACTGTGG----
----------CTGTGGTTTN
 C G A T A T C G A T G C G A C T A C T G G T A C T A G C A G T C G T A C C G T A A G T C C A G T A C T G A C G T A T C G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGCTGCCCCACTGTGG
-GGCCYCCTGCTGDGH
 C G A T A T C G A T G C G A C T A C T G G T A C T A G C A G T C G T A C C G T A A G T C C A G T A C T G A C G T A T C G A C T G
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGCTGCCCCACTGTGG
-GACCCCCCGCTGTG-
 C G A T A T C G A T G C G A C T A C T G G T A C T A G C A G T C G T A C C G T A A G T C C A G T A C T G A C G T A T C G A C T G
A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TGCTGCCCCACTGTGG--
---NNTCCTGCTGTGNNN
 C G A T A T C G A T G C G A C T A C T G G T A C T A G C A G T C G T A C C G T A A G T C C A G T A C T G A C G T A T C G A C T G A C G T A C G T
A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGCTGCCCCACTGTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T C G A T A T C G A T G C G A C T A C T G G T A C T A G C A G T C G T A C C G T A A G T C C A G T A C T G A C G T A T C G A C T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A