Information for 5-AGCCACAGGG (Motif 6)

G C T A A T C G G T A C G A T C C G T A G A T C G T C A C A T G A C T G A C T G
Reverse Opposite:
T G A C T G A C G T A C C A G T C T A G G C A T C T A G C A T G T A G C C G A T
p-value:1e-11
log p-value:-2.578e+01
Information Content per bp:1.451
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif4.92%
Number of Background Sequences with motif658.7
Percentage of Background Sequences with motif1.37%
Average Position of motif in Targets50.0 +/- 25.3bp
Average Position of motif in Background51.1 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AGCCACAGGG-
AGCCTCAGGCA
 G C T A A T C G G T A C G A T C C G T A G A T C G T C A C A T G A C T G A C T G A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGCCACAGGG-
AGCCTCAGGCA
 G C T A A T C G G T A C G A T C C G T A G A T C G T C A C A T G A C T G A C T G A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGCCACAGGG-
CGCCTCAGGCA
 G C T A A T C G G T A C G A T C C G T A G A T C G T C A C A T G A C T G A C T G A C G T
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AGCCACAGGG---
-GCCTCAGGGCAT
 G C T A A T C G G T A C G A T C C G T A G A T C G T C A C A T G A C T G A C T G A C G T A C G T A C G T
A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AGCCACAGGG---
NTNGCCTCAGGCNNN
 A C G T A C G T G C T A A T C G G T A C G A T C C G T A G A T C G T C A C A T G A C T G A C T G A C G T A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AGCCACAGGG
AAACCACAGAN
 A C G T G C T A A T C G G T A C G A T C C G T A G A T C G T C A C A T G A C T G A C T G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGCCACAGGG---
-SCCTSAGGSCAW
 G C T A A T C G G T A C G A T C C G T A G A T C G T C A C A T G A C T G A C T G A C G T A C G T A C G T
A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGCCACAGGG---
ATTGCCTCAGGCAAT
 A C G T A C G T G C T A A T C G G T A C G A T C C G T A G A T C G T C A C A T G A C T G A C T G A C G T A C G T A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGCCACAGGG
CAGCC------
 A C G T G C T A A T C G G T A C G A T C C G T A G A T C G T C A C A T G A C T G A C T G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGCCACAGGG
BCAGACWA----
 A C G T A C G T G C T A A T C G G T A C G A T C C G T A G A T C G T C A C A T G A C T G A C T G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T