Information for 6-CACTGACACC (Motif 5)

A G T C C G T A A G T C A C G T A C T G C G T A A G T C C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C T G A C G T A G T C C G T A A C T G A C G T A C T G
p-value:1e-9
log p-value:-2.117e+01
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif10.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets39.4 +/- 19.5bp
Average Position of motif in Background43.1 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CACTGACACC-----
ATAAATGACACCTATCA
 A C G T A C G T A G T C C G T A A G T C A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:CACTGACACC-
---TGACACCT
 A G T C C G T A A G T C A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CACTGACACC
VGCTGWCAVB
 A G T C C G T A A G T C A C G T A C T G C G T A A G T C C G T A A G T C A G T C
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

TBX5/MA0807.1/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CACTGACACC-
---TCACACCT
 A G T C C G T A A G T C A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T

TBX4/MA0806.1/Jaspar

Match Rank:5
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CACTGACACC-
---TCACACCT
 A G T C C G T A A G T C A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CACTGACACC
--TTGACAG-
 A G T C C G T A A G T C A C G T A C T G C G T A A G T C C G T A A G T C A G T C
A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CACTGACACC-
-ACTGAAACCA
 A G T C C G T A A G T C A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T
A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

MGA/MA0801.1/Jaspar

Match Rank:8
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CACTGACACC-
---TCACACCT
 A G T C C G T A A G T C A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CACTGACACC
--YTGWCADY
 A G T C C G T A A G T C A C G T A C T G C G T A A G T C C G T A A G T C A G T C
A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

TBX2/MA0688.1/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CACTGACACC--
-TTTCACACCTN
 A G T C C G T A A G T C A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T A C G T
A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T