Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| YY1(Zf)/Promoter/Homer | 1e-60 | -1.394e+02 | 0.0000 | 65.0 | 9.94% | 197.7 | 0.49% | motif file (matrix) |
svg |
2 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.552e+01 | 0.0000 | 47.0 | 7.19% | 1246.9 | 3.12% | motif file (matrix) |
svg |
3 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-5 | -1.300e+01 | 0.0003 | 131.0 | 20.03% | 5391.8 | 13.48% | motif file (matrix) |
svg |
4 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-5 | -1.283e+01 | 0.0003 | 97.0 | 14.83% | 3689.1 | 9.23% | motif file (matrix) |
svg |
5 |
| ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer | 1e-5 | -1.254e+01 | 0.0003 | 9.0 | 1.38% | 71.6 | 0.18% | motif file (matrix) |
svg |
6 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-4 | -1.122e+01 | 0.0008 | 143.0 | 21.87% | 6224.9 | 15.57% | motif file (matrix) |
svg |
7 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.118e+01 | 0.0008 | 69.0 | 10.55% | 2473.6 | 6.19% | motif file (matrix) |
svg |
8 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-4 | -1.107e+01 | 0.0008 | 60.0 | 9.17% | 2060.2 | 5.15% | motif file (matrix) |
svg |
9 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-4 | -1.053e+01 | 0.0011 | 13.0 | 1.99% | 194.7 | 0.49% | motif file (matrix) |
svg |
10 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-4 | -1.044e+01 | 0.0011 | 61.0 | 9.33% | 2153.1 | 5.38% | motif file (matrix) |
svg |
11 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-3 | -9.068e+00 | 0.0038 | 95.0 | 14.53% | 3962.0 | 9.91% | motif file (matrix) |
svg |
12 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-3 | -8.640e+00 | 0.0054 | 13.0 | 1.99% | 235.9 | 0.59% | motif file (matrix) |
svg |
13 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-3 | -8.530e+00 | 0.0055 | 73.0 | 11.16% | 2901.8 | 7.26% | motif file (matrix) |
svg |
14 |
| OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer | 1e-3 | -7.941e+00 | 0.0093 | 8.0 | 1.22% | 103.6 | 0.26% | motif file (matrix) |
svg |
15 |
| GFY(?)/Promoter/Homer | 1e-3 | -7.815e+00 | 0.0098 | 8.0 | 1.22% | 105.3 | 0.26% | motif file (matrix) |
svg |
16 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-3 | -7.623e+00 | 0.0111 | 17.0 | 2.60% | 405.4 | 1.01% | motif file (matrix) |
svg |
17 |
| GFX(?)/Promoter/Homer | 1e-2 | -6.079e+00 | 0.0490 | 4.0 | 0.61% | 33.1 | 0.08% | motif file (matrix) |
svg |
18 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.973e+00 | 0.0515 | 53.0 | 8.10% | 2162.0 | 5.41% | motif file (matrix) |
svg |
19 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-2 | -5.832e+00 | 0.0562 | 23.0 | 3.52% | 737.4 | 1.84% | motif file (matrix) |
svg |
20 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-2 | -5.679e+00 | 0.0622 | 6.0 | 0.92% | 87.4 | 0.22% | motif file (matrix) |
svg |
21 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-2 | -5.599e+00 | 0.0642 | 26.0 | 3.98% | 887.6 | 2.22% | motif file (matrix) |
svg |
22 |
| Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.248e+00 | 0.0870 | 18.0 | 2.75% | 553.5 | 1.38% | motif file (matrix) |
svg |
23 |
| p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer | 1e-2 | -5.102e+00 | 0.0963 | 22.0 | 3.36% | 739.6 | 1.85% | motif file (matrix) |
svg |
24 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-2 | -4.705e+00 | 0.1372 | 41.0 | 6.27% | 1692.3 | 4.23% | motif file (matrix) |
svg |