Information for 19-CTGGACGACC (Motif 51)

A G T C A G C T A C T G A C T G C G T A A G T C A C T G C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G T C A C T G A C G T T G A C A G T C C T G A A C T G
p-value:1e-3
log p-value:-8.757e+00
Information Content per bp:1.940
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif16.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets38.0 +/- 31.7bp
Average Position of motif in Background58.0 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0067.1_Hoxc12/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTGGACGACC---
GNNNTTTTACGACCTNA
 A C G T A C G T A C G T A C G T A G T C A G C T A C T G A C T G C G T A A G T C A C T G C G T A A G T C A G T C A C G T A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTGGACGACC----
--GGACCACCCACG
 A G T C A G C T A C T G A C T G C G T A A G T C A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

HOXC12/MA0906.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGGACGACC
NTTTTACGACC
 A C G T A G T C A G C T A C T G A C T G C G T A A G T C A C T G C G T A A G T C A G T C
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

HOXC11/MA0651.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGGACGACC
NTTTTACGACC
 A C G T A G T C A G C T A C T G A C T G C G T A A G T C A C T G C G T A A G T C A G T C
C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C

PH0065.1_Hoxc10/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTGGACGACC---
ANNTTTTACGACNTNN
 A C G T A C G T A C G T A G T C A G C T A C T G A C T G C G T A A G T C A C T G C G T A A G T C A G T C A C G T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PH0077.1_Hoxd12/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTGGACGACC---
NNNATTTTACGACNNTN
 A C G T A C G T A C G T A C G T A G T C A G C T A C T G A C T G C G T A A G T C A C T G C G T A A G T C A G T C A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTGGACGACC-----
CATAAGACCACCATTAC
 A C G T A C G T A G T C A G C T A C T G A C T G C G T A A G T C A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

PH0066.1_Hoxc11/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTGGACGACC---
NNNTTTTACGACNTTN
 A C G T A C G T A C G T A G T C A G C T A C T G A C T G C G T A A G T C A C T G C G T A A G T C A G T C A C G T A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

Hoxa11/MA0911.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTGGACGACC
ANTTTTACGACC
 A C G T A C G T A G T C A G C T A C T G A C T G C G T A A G T C A C T G C G T A A G T C A G T C
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

PH0076.1_Hoxd11/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTGGACGACC---
ANNATTTTACGACNTNA
 A C G T A C G T A C G T A C G T A G T C A G C T A C T G A C T G C G T A A G T C A C T G C G T A A G T C A G T C A C G T A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A