Information for 24-ACGTGCTGTCATGCAT (Motif 45)

G T C A A G T C A C T G A C G T A C T G A G T C A C G T A C T G A G C T A G T C C T G A A C G T A C T G A G T C C T G A A C G T
Reverse Opposite:
C G T A A G C T A C T G A G T C C G T A A G C T C T A G T C G A A G T C C G T A A C T G A G T C C G T A G T A C A C T G A C G T
p-value:1e-6
log p-value:-1.415e+01
Information Content per bp:1.908
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.3 +/- 18.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACGTGCTGTCATGCAT
RTACGTGC----------
 A C G T A C G T G T C A A G T C A C T G A C G T A C T G A G T C A C G T A C T G A G C T A G T C C T G A A C G T A C T G A G T C C T G A A C G T
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ACGTGCTGTCATGCAT
TNNNNGGTGTCATNTNT
 A C G T G T C A A G T C A C T G A C G T A C T G A G T C A C G T A C T G A G C T A G T C C T G A A C G T A C T G A G T C C T G A A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:ACGTGCTGTCATGCAT
----GCTGTCAA----
 G T C A A G T C A C T G A C G T A C T G A G T C A C G T A C T G A G C T A G T C C T G A A C G T A C T G A G T C C T G A A C G T
A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACGTGCTGTCATGCAT
GGACGTGC----------
 A C G T A C G T G T C A A G T C A C T G A C G T A C T G A G T C A C G T A C T G A G C T A G T C C T G A A C G T A C T G A G T C C T G A A C G T
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ACGTGCTGTCATGCAT
TACGTGCV---------
 A C G T G T C A A G T C A C T G A C G T A C T G A G T C A C G T A C T G A G C T A G T C C T G A A C G T A C T G A G T C C T G A A C G T
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:ACGTGCTGTCATGCAT
----CCTGTCAA----
 G T C A A G T C A C T G A C G T A C T G A G T C A C G T A C T G A G C T A G T C C T G A A C G T A C T G A G T C C T G A A C G T
A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----ACGTGCTGTCATGCAT
GGGTACGTGC----------
 A C G T A C G T A C G T A C G T G T C A A G T C A C T G A C G T A C T G A G T C A C G T A C T G A G C T A G T C C T G A A C G T A C T G A G T C C T G A A C G T
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:ACGTGCTGTCATGCAT
----NCTGTCAATCAN
 G T C A A G T C A C T G A C G T A C T G A G T C A C G T A C T G A G C T A G T C C T G A A C G T A C T G A G T C C T G A A C G T
A C G T A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:ACGTGCTGTCATGCAT---
----SCAGYCADGCATGAC
 G T C A A G T C A C T G A C G T A C T G A G T C A C G T A C T G A G C T A G T C C T G A A C G T A C T G A G T C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ACGTGCTGTCATGCAT
---GSCTGTCACTCA-
 G T C A A G T C A C T G A C G T A C T G A G T C A C G T A C T G A G C T A G T C C T G A A C G T A C T G A G T C C T G A A C G T
A C G T A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T