Information for 18-ACTGATGCTGCTA (Motif 39)

C G T A A G T C A C G T A C T G C G T A A C G T A C T G A G T C A C G T A C T G A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A G T C C G T A A C T G A G T C C G T A A C G T A G T C C G T A A C T G A C G T
p-value:1e-7
log p-value:-1.689e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.5 +/- 12.8bp
Average Position of motif in Background65.6 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:ACTGATGCTGCTA----
--AGATGCTRCTRCCHT
 C G T A A G T C A C G T A C T G C G T A A C G T A C T G A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ACTGATGCTGCTA
---NATGTTGCAA
 C G T A A G T C A C G T A C T G C G T A A C G T A C T G A G T C A C G T A C T G A G T C A C G T C G T A
A C G T A C G T A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A

GCM1/MA0646.1/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:ACTGATGCTGCTA-
---CATGCGGGTAC
 C G T A A G T C A C G T A C T G C G T A A C G T A C T G A G T C A C G T A C T G A G T C A C G T C G T A A C G T
A C G T A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ACTGATGCTGCTA
AACAGATGGT----
 A C G T C G T A A G T C A C G T A C T G C G T A A C G T A C T G A G T C A C G T A C T G A G T C A C G T C G T A
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:ACTGATGCTGCTA-
----MTGATGCAAT
 C G T A A G T C A C G T A C T G C G T A A C G T A C T G A G T C A C G T A C T G A G T C A C G T C G T A A C G T
A C G T A C G T A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

PB0144.1_Lef1_2/Jaspar

Match Rank:6
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------ACTGATGCTGCTA
NNANTGATTGATNTTN---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C T G C G T A A C G T A C T G A G T C A C G T A C T G A G T C A C G T C G T A
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C A C G T A C G T A C G T

ATF4/MA0833.1/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:ACTGATGCTGCTA--
--GGATGATGCAATA
 C G T A A G T C A C G T A C T G C G T A A C G T A C T G A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T
A C G T A C G T C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:8
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------ACTGATGCTGCTA-
ACTYKNATTCGTGNTACTTC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C T G C G T A A C G T A C T G A G T C A C G T A C T G A G T C A C G T C G T A A C G T
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:ACTGATGCTGCTA-
----ATGATGCAAT
 C G T A A G T C A C G T A C T G C G T A A C G T A C T G A G T C A C G T A C T G A G T C A C G T C G T A A C G T
A C G T A C G T A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

GCM2/MA0767.1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:ACTGATGCTGCTA
---TATGCGGGTA
 C G T A A G T C A C G T A C T G C G T A A C G T A C T G A G T C A C G T A C T G A G T C A C G T C G T A
A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A