p-value: | 1e-7 |
log p-value: | -1.689e+01 |
Information Content per bp: | 1.957 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.61% |
Number of Background Sequences with motif | 2.6 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 48.0 +/- 15.7bp |
Average Position of motif in Background | 59.7 +/- 13.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
Match Rank: | 1 |
Score: | 0.69 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGTCGCCTTG BNTGDCCTTG |
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Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer
Match Rank: | 2 |
Score: | 0.67 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGTCGCCTTG-- --TGACCTTGAN |
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Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer
Match Rank: | 3 |
Score: | 0.67 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGTCGCCTTG-- --TGACCTTGAV |
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Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 4 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGTCGCCTTG---- NGTTGCCATGGCAA |
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Nr5a2/MA0505.1/Jaspar
Match Rank: | 5 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGTCGCCTTG----- GCTGACCTTGAACTN |
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Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
Match Rank: | 6 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TGTCGCCTTG- -NTGACCTTGA |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 7 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGTCGCCTTG----- -GTTGCCATGGNAAC |
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PB0113.1_E2F3_2/Jaspar
Match Rank: | 8 |
Score: | 0.60 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TGTCGCCTTG-- NNNNTTGGCGCCGANNN |
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PROX1/MA0794.1/Jaspar
Match Rank: | 9 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TGTCGCCTTG CAAGACGCCTTA |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGTCGCCTTG -GTGACCTT- |
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