Information for 17-AACRCMAWGGCAG (Motif 35)

T C G A C G T A A G T C C T A G A G T C G T A C C G T A C G T A A C T G A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C A G T C C G A T A C G T C A G T A C T G A G T C A C T G A C G T A C G T
p-value:1e-8
log p-value:-1.849e+01
Information Content per bp:1.888
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.8 +/- 26.3bp
Average Position of motif in Background47.2 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AACRCMAWGGCAG
--AACAAAGG---
 T C G A C G T A A G T C C T A G A G T C G T A C C G T A C G T A A C T G A C T G A G T C C G T A A C T G
A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AACRCMAWGGCAG
AAAACAAAGG---
 T C G A C G T A A G T C C T A G A G T C G T A C C G T A C G T A A C T G A C T G A G T C C G T A A C T G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AACRCMAWGGCAG
CTCACACAATGGCGC
 A C G T A C G T T C G A C G T A A G T C C T A G A G T C G T A C C G T A C G T A A C T G A C T G A G T C C G T A A C T G
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AACRCMAWGGCAG
AAAACAATGG---
 T C G A C G T A A G T C C T A G A G T C G T A C C G T A C G T A A C T G A C T G A G T C C G T A A C T G
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AACRCMAWGGCAG-
--CAAGATGGCGGC
 T C G A C G T A A G T C C T A G A G T C G T A C C G T A C G T A A C T G A C T G A G T C C G T A A C T G A C G T
A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY2/MA0748.1/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AACRCMAWGGCAG--
----TAATGGCGGNC
 T C G A C G T A A G T C C T A G A G T C G T A C C G T A C G T A A C T G A C T G A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AACRCMAWGGCAG
--RACAAWGG---
 T C G A C G T A A G T C C T A G A G T C G T A C C G T A C G T A A C T G A C T G A G T C C G T A A C T G
A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AACRCMAWGGCAG
VRAACAATGG---
 T C G A C G T A A G T C C T A G A G T C G T A C C G T A C G T A A C T G A C T G A G T C C G T A A C T G
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:9
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:AACRCMAWGGCAG----
-------TGGCAGTTGN
 T C G A C G T A A G T C C T A G A G T C G T A C C G T A C G T A A C T G A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

EGR2/MA0472.2/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AACRCMAWGGCAG
-ACGCCCACGCA-
 T C G A C G T A A G T C C T A G A G T C G T A C C G T A C G T A A C T G A C T G A G T C C G T A A C T G
A C G T G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T