Information for 14-CAAGTAGTGCCTG (Motif 33)

A G T C C G T A C G T A A C T G A C G T C G T A A T C G A C G T A C T G A T G C A G T C C G A T A C T G
Reverse Opposite:
A G T C C G T A A C T G T A C G A G T C C G T A A T G C A C G T C G T A A G T C A C G T A C G T A C T G
p-value:1e-8
log p-value:-1.965e+01
Information Content per bp:1.938
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.2 +/- 24.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CAAGTAGTGCCTG
NTCAAGTGG------
 A C G T A C G T A G T C C G T A C G T A A C T G A C G T C G T A A T C G A C G T A C T G A T G C A G T C C G A T A C T G
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CAAGTAGTGCCTG
NTCAAGTGGN-----
 A C G T A C G T A G T C C G T A C G T A A C T G A C G T C G T A A T C G A C G T A C T G A T G C A G T C C G A T A C T G
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:3
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CAAGTAGTGCCTG-
TTCNAAGTACTTNNNNN
 A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C G T C G T A A T C G A C G T A C T G A T G C A G T C C G A T A C T G A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

PB0155.1_Osr2_2/Jaspar

Match Rank:4
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CAAGTAGTGCCTG
NNTGTAGGTAGCANNT-
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C G T C G T A A T C G A C G T A C T G A T G C A G T C C G A T A C T G
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CAAGTAGTGCCTG
NNNTTAGGTAGCNTNT-
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C G T C G T A A T C G A C G T A C T G A T G C A G T C C G A T A C T G
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T

HOXA5/MA0158.1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CAAGTAGTGCCTG
-AATTAGTG----
 A G T C C G T A C G T A A C T G A C G T C G T A A T C G A C G T A C T G A T G C A G T C C G A T A C T G
A C G T T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T A C G T A C G T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CAAGTAGTGCCTG
CCAATTAA------
 A C G T A G T C C G T A C G T A A C T G A C G T C G T A A T C G A C G T A C T G A T G C A G T C C G A T A C T G
T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PH0107.1_Msx2/Jaspar

Match Rank:8
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------CAAGTAGTGCCTG
GAAGACCAATTAGCGCT--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C G T C G T A A T C G A C G T A C T G A T G C A G T C C G A T A C T G
T C A G T G C A C T G A T A C G C T G A A T G C G A T C C G T A G T C A C G A T G A C T C T G A C A T G G A T C C A T G G A T C A G C T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CAAGTAGTGCCTG
CCAATTAA------
 A C G T A G T C C G T A C G T A A C T G A C G T C G T A A T C G A C G T A C T G A T G C A G T C C G A T A C T G
T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PH0033.1_Gbx1/Jaspar

Match Rank:10
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----CAAGTAGTGCCTG
TNCACTAATTAGTNNNN-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C G T C G T A A T C G A C G T A C T G A T G C A G T C C G A T A C T G
C G A T T G C A T G A C T G C A G T A C G A C T G T C A C T G A A G C T A C G T C T G A A C T G A G C T A C T G T A C G G A T C C G T A A C G T