Information for 4-GGGCAVTGTGACT (Motif 3)

A C T G A C T G A C T G A G T C G T C A T A C G A C G T A C T G A C G T A C T G C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A G T C C G T A A G T C G T C A A G T C A C G T A C T G A G T C G T A C G T A C
p-value:1e-16
log p-value:-3.813e+01
Information Content per bp:1.870
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.0 +/- 14.0bp
Average Position of motif in Background38.6 +/- 8.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF2/MA0526.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGGCAVTGTGACT
--GTCATGTGACC
 A C T G A C T G A C T G A G T C G T C A T A C G A C G T A C T G A C G T A C T G C G T A A G T C A C G T
A C G T A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C

ESR2/MA0258.2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGGCAVTGTGACT-
AGGNCANNGTGACCT
 A C G T A C T G A C T G A C T G A G T C G T C A T A C G A C G T A C T G A C G T A C T G C G T A A G T C A C G T A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGGCAVTGTGACT
--RTCATGTGAC-
 A C T G A C T G A C T G A G T C G T C A T A C G A C G T A C T G A C G T A C T G C G T A A G T C A C G T
A C G T A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGGCAVTGTGACT--
GGTCANNGTGACCTN
 A C T G A C T G A C T G A G T C G T C A T A C G A C G T A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

USF1/MA0093.2/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGGCAVTGTGACT
--GCCACGTGACC
 A C T G A C T G A C T G A G T C G T C A T A C G A C G T A C T G A C G T A C T G C G T A A G T C A C G T
A C G T A C G T T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C

Pax2/MA0067.1/Jaspar

Match Rank:6
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GGGCAVTGTGACT
-----NCGTGACN
 A C T G A C T G A C T G A G T C G T C A T A C G A C G T A C T G A C G T A C T G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGGCAVTGTGACT
--KCCACGTGAC-
 A C T G A C T G A C T G A G T C G T C A T A C G A C G T A C T G A C G T A C T G C G T A A G T C A C G T
A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T

ESR1/MA0112.3/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGGCAVTGTGACT--
CAGGTCACCGTGACCTT
 A C G T A C G T A C T G A C T G A C T G A G T C G T C A T A C G A C G T A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

FOSL1/MA0477.1/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GGGCAVTGTGACT----
------GGTGACTCATG
 A C T G A C T G A C T G A G T C G T C A T A C G A C G T A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C G T A C T G C G T A T A G C A C G T G T A C C G T A A C G T T A C G

Nr2e1/MA0676.1/Jaspar

Match Rank:10
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:GGGCAVTGTGACT---
-------TTGACTTTT
 A C T G A C T G A C T G A G T C G T C A T A C G A C G T A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T