Information for 10-GCAGCGCGGG (Motif 14)

A C T G A G T C T C G A A T C G A G T C C T A G T G A C T A C G A C T G C A T G
Reverse Opposite:
G T A C G T A C A T G C A C T G A G T C T C A G A T G C A G C T A C T G A G T C
p-value:1e-8
log p-value:-2.013e+01
Information Content per bp:1.828
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.51%
Number of Background Sequences with motif192.0
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets36.7 +/- 18.6bp
Average Position of motif in Background50.4 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC3/MA0697.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCGCGGG---
NCGCAGCGGGGGGTC
 A C G T A C G T A C T G A G T C T C G A A T C G A G T C C T A G T G A C T A C G A C T G C A T G A C G T A C G T A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

ZIC1/MA0696.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCGCGGG---
CACAGCGGGGGGTC
 A C G T A C T G A G T C T C G A A T C G A G T C C T A G T G A C T A C G A C T G C A T G A C G T A C G T A C G T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

ZIC4/MA0751.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCGCGGG---
NCNCAGCGGGGGGTC
 A C G T A C G T A C T G A G T C T C G A A T C G A G T C C T A G T G A C T A C G A C T G C A T G A C G T A C G T A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GCAGCGCGGG-
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C T C G A A T C G A G T C C T A G T G A C T A C G A C T G C A T G A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

POL011.1_XCPE1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCAGCGCGGG---
---GGGCGGGACC
 A C T G A G T C T C G A A T C G A G T C C T A G T G A C T A C G A C T G C A T G A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCGCGGG---
DCHCAGCAGGRGGCC
 A C G T A C G T A C T G A G T C T C G A A T C G A G T C C T A G T G A C T A C G A C T G C A T G A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCAGCGCGGG-
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C T G A G T C T C G A A T C G A G T C C T A G T G A C T A C G A C T G C A T G A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

E2F4/MA0470.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCAGCGCGGG----
---GGGCGGGAAGG
 A C T G A G T C T C G A A T C G A G T C C T A G T G A C T A C G A C T G C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

Tcfl5/MA0632.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCAGCGCGGG--
--GGCACGTGCC
 A C T G A G T C T C G A A T C G A G T C C T A G T G A C T A C G A C T G C A T G A C G T A C G T
A C G T A C G T C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCGCGGG
DCTCAGCAGG--
 A C G T A C G T A C T G A G T C T C G A A T C G A G T C C T A G T G A C T A C G A C T G C A T G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T