Information for 11-TAGCCTCTCTCAG (Motif 12)

C G A T C T G A A C T G A G T C A G T C A C G T G T A C A G C T A T G C A C G T A T G C C G T A A C T G
Reverse Opposite:
G T A C A C G T A T C G C G T A A T C G C T G A C A T G C G T A A C T G A C T G A G T C A G C T C G T A
p-value:1e-9
log p-value:-2.189e+01
Information Content per bp:1.841
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif10.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.9 +/- 26.2bp
Average Position of motif in Background59.7 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TAGCCTCTCTCAG
CAGCC--------
 C G A T C T G A A C T G A G T C A G T C A C G T G T A C A G C T A T G C A C G T A T G C C G T A A C T G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TAGCCTCTCTCAG
BCAGACWA------
 A C G T C G A T C T G A A C T G A G T C A G T C A C G T G T A C A G C T A T G C A C G T A T G C C G T A A C T G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:3
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TAGCCTCTCTCAG-
ATTGCCTCAGGCAAT
 A C G T C G A T C T G A A C T G A G T C A G T C A C G T G T A C A G C T A T G C A C G T A T G C C G T A A C T G A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--TAGCCTCTCTCAG
CNAGGCCT-------
 A C G T A C G T C G A T C T G A A C T G A G T C A G T C A C G T G T A C A G C T A T G C A C G T A T G C C G T A A C T G
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:5
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-TAGCCTCTCTCAG
CAAGCTT-------
 A C G T C G A T C T G A A C T G A G T C A G T C A C G T G T A C A G C T A T G C A C G T A T G C C G T A A C T G
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.48
Offset:1
Orientation:forward strand
Alignment:TAGCCTCTCTCAG
-AGCCTCAGGCA-
 C G A T C T G A A C T G A G T C A G T C A C G T G T A C A G C T A T G C A C G T A T G C C G T A A C T G
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.48
Offset:3
Orientation:forward strand
Alignment:TAGCCTCTCTCAG
---CCTTTGTT--
 C G A T C T G A A C T G A G T C A G T C A C G T G T A C A G C T A T G C A C G T A T G C C G T A A C T G
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.47
Offset:6
Orientation:reverse strand
Alignment:TAGCCTCTCTCAG
------NTGTCAN
 C G A T C T G A A C T G A G T C A G T C A C G T G T A C A G C T A T G C A C G T A T G C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.47
Offset:-4
Orientation:reverse strand
Alignment:----TAGCCTCTCTCAG
NNACTTGCCTT------
 A C G T A C G T A C G T A C G T C G A T C T G A A C T G A G T C A G T C A C G T G T A C A G C T A T G C A C G T A T G C C G T A A C T G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:10
Score:0.47
Offset:1
Orientation:forward strand
Alignment:TAGCCTCTCTCAG
-AGCCTCAGGCA-
 C G A T C T G A A C T G A G T C A G T C A C G T G T A C A G C T A T G C A C G T A T G C C G T A A C T G
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T