Information for 1-VRTCACGTGACHN (Motif 1)

T C A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C A C G T
Reverse Opposite:
T G C A C T A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C A G T C
p-value:1e-317
log p-value:-7.311e+02
Information Content per bp:1.597
Number of Target Sequences with motif322.0
Percentage of Target Sequences with motif44.97%
Number of Background Sequences with motif1098.2
Percentage of Background Sequences with motif2.33%
Average Position of motif in Targets52.2 +/- 15.6bp
Average Position of motif in Background50.0 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFEB/MA0692.1/Jaspar

Match Rank:1
Score:0.97
Offset:1
Orientation:forward strand
Alignment:VRTCACGTGACHN
-ATCACGTGAC--
 T C A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C A C G T
A C G T T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T A C G T

TFEC/MA0871.1/Jaspar

Match Rank:2
Score:0.95
Offset:1
Orientation:forward strand
Alignment:VRTCACGTGACHN
-ATCACGTGAC--
 T C A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C A C G T
A C G T T C G A C A G T G T A C C G T A A G T C T C A G G A C T A C T G T C G A A G T C A C G T A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:3
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:VRTCACGTGACHN
-ACCACGTGAC--
 T C A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C A C G T
A C G T T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:4
Score:0.95
Offset:1
Orientation:forward strand
Alignment:VRTCACGTGACHN
-GCCACGTGACC-
 T C A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C A C G T
A C G T T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:5
Score:0.94
Offset:1
Orientation:forward strand
Alignment:VRTCACGTGACHN
-GTCACGTGACYV
 T C A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C A C G T
A C G T T C A G A G C T A T G C C G T A A G T C T C A G A C G T A T C G T C G A A G T C G A T C T G A C

USF2/MA0526.1/Jaspar

Match Rank:6
Score:0.94
Offset:1
Orientation:forward strand
Alignment:VRTCACGTGACHN
-GTCATGTGACC-
 T C A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C A C G T
A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:VRTCACGTGACHN
--TCACGTGACC-
 T C A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C A C G T
A C G T A C G T A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C A C G T

TFE3/MA0831.1/Jaspar

Match Rank:8
Score:0.94
Offset:1
Orientation:forward strand
Alignment:VRTCACGTGACHN
-ATCACGTGAC--
 T C A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C A C G T
A C G T T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T

BHLHE41/MA0636.1/Jaspar

Match Rank:9
Score:0.93
Offset:1
Orientation:forward strand
Alignment:VRTCACGTGACHN
-GTCACGTGAC--
 T C A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C A C G T
A C G T T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C A C G T A C G T

MLXIPL/MA0664.1/Jaspar

Match Rank:10
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:VRTCACGTGACHN
-ATCACGTGAT--
 T C A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C A C G T
A C G T C T G A C G A T A G T C G T C A A G T C A T C G G C A T A T C G G T C A G A C T A C G T A C G T