Information for 2-GGGGTGCGCGGAGCTC (Motif 4)

A C T G C T A G A C T G A C T G A C G T C T A G A T G C A C T G A G T C A C T G A C T G T G C A A C T G A G T C A C G T A T G C
Reverse Opposite:
A T C G C G T A C T A G A G T C A C G T G T A C A G T C C T A G A G T C A T C G A G T C C G T A A G T C A G T C A G T C A G T C
p-value:1e-13
log p-value:-3.002e+01
Information Content per bp:1.845
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.2 +/- 25.3bp
Average Position of motif in Background76.7 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GGGGTGCGCGGAGCTC
--RGKGGGCGGAGC--
 A C T G C T A G A C T G A C T G A C G T C T A G A T G C A C T G A G T C A C T G A C T G T G C A A C T G A G T C A C G T A T G C
A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGGGTGCGCGGAGCTC
--RGKGGGCGKGGC--
 A C T G C T A G A C T G A C T G A C G T C T A G A T G C A C T G A G T C A C T G A C T G T G C A A C T G A G T C A C G T A T G C
A C G T A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C A C G T A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGGGTGCGCGGAGCTC
--RGTGGGYGTGGC--
 A C T G C T A G A C T G A C T G A C G T C T A G A T G C A C T G A G T C A C T G A C T G T G C A A C T G A G T C A C G T A T G C
A C G T A C G T C T G A T C A G C A G T C T A G A T C G A C T G G A T C C A T G A C G T C A T G A C T G A G T C A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGGGTGCGCGGAGCTC
NGCGTGGGCGGR----
 A C T G C T A G A C T G A C T G A C G T C T A G A T G C A C T G A G T C A C T G A C T G T G C A A C T G A G T C A C G T A T G C
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGGGTGCGCGGAGCTC
-NNVDGGGYGGGGCYN
 A C T G C T A G A C T G A C T G A C G T C T A G A T G C A C T G A G T C A C T G A C T G T G C A A C T G A G T C A C G T A T G C
A C G T T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

EGR1/MA0162.2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGGGTGCGCGGAGCTC
GGCGGGGGCGGGGG--
 A C T G C T A G A C T G A C T G A C G T C T A G A T G C A C T G A G T C A C T G A C T G T G C A A C T G A G T C A C G T A T G C
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGGGTGCGCGGAGCTC-
NAAGGGGGCGTGGCTTN
 A C T G C T A G A C T G A C T G A C G T C T A G A T G C A C T G A G T C A C T G A C T G T G C A A C T G A G T C A C G T A T G C A C G T
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGGGTGCGCGGAGCTC
GGGNGGGGGCGGGGC--
 A C G T A C T G C T A G A C T G A C T G A C G T C T A G A T G C A C T G A G T C A C T G A C T G T G C A A C T G A G T C A C G T A T G C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGGGTGCGCGGAGCTC
--AGGGGGCGGGGCTG
 A C T G C T A G A C T G A C T G A C G T C T A G A T G C A C T G A G T C A C T G A C T G T G C A A C T G A G T C A C G T A T G C
A C G T A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:GGGGTGCGCGGAGCTC
--------CGGAGC--
 A C T G C T A G A C T G A C T G A C G T C T A G A T G C A C T G A G T C A C T G A C T G T G C A A C T G A G T C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T