Information for 12-CKGCGTTTCT (Motif 27)

A G T C A C T G A C T G A G T C A C T G A C G T C G A T A C G T A G T C A C G T
Reverse Opposite:
C G T A C T A G C G T A G C T A C G T A G T A C A C T G A G T C G T A C A C T G
p-value:1e-5
log p-value:-1.170e+01
Information Content per bp:1.850
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif13.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets53.7 +/- 24.0bp
Average Position of motif in Background48.7 +/- 40.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CKGCGTTTCT
-TGCGTG---
 A G T C A C T G A C T G A G T C A C T G A C G T C G A T A C G T A G T C A C G T
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CKGCGTTTCT--
-TTCTTATCTGT
 A G T C A C T G A C T G A G T C A C T G A C G T C G A T A C G T A G T C A C G T A C G T A C G T
A C G T A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CKGCGTTTCT-
-NCCTTATCTG
 A G T C A C T G A C T G A G T C A C T G A C G T C G A T A C G T A G T C A C G T A C G T
A C G T A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CKGCGTTTCT-
-NNCTTATCTN
 A G T C A C T G A C T G A G T C A C T G A C G T C G A T A C G T A G T C A C G T A C G T
A C G T A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C

GATA3/MA0037.2/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CKGCGTTTCT
--TCTTATCT
 A G T C A C T G A C T G A G T C A C T G A C G T C G A T A C G T A G T C A C G T
A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CKGCGTTTCT--
CAAAGGCGTGGCCAG
 A C G T A C G T A C G T A G T C A C T G A C T G A G T C A C T G A C G T C G A T A C G T A G T C A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

PB0143.1_Klf7_2/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CKGCGTTTCT--
NNNTNGGGCGTATNNTN
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A G T C A C T G A C G T C G A T A C G T A G T C A C G T A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CKGCGTTTCT--
--YCTTATCTBN
 A G T C A C T G A C T G A G T C A C T G A C G T C G A T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C

Gata4/MA0482.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CKGCGTTTCT---
--TCTTATCTCCC
 A G T C A C T G A C T G A G T C A C T G A C G T C G A T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CKGCGTTTCT
TTGCGTGCVA
 A G T C A C T G A C T G A G T C A C T G A C G T C G A T A C G T A G T C A C G T
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A