| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
| 1 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-10 | -2.303e+01 | 0.0000 | 143.0 | 24.20% | 5291.8 | 14.25% | motif file (matrix) |
svg |
| 2 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-7 | -1.819e+01 | 0.0000 | 149.0 | 25.21% | 6004.9 | 16.17% | motif file (matrix) |
svg |
| 3 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-5 | -1.367e+01 | 0.0001 | 100.0 | 16.92% | 3881.9 | 10.45% | motif file (matrix) |
svg |
| 4 |
| OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer | 1e-5 | -1.318e+01 | 0.0002 | 11.0 | 1.86% | 108.6 | 0.29% | motif file (matrix) |
svg |
| 5 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-5 | -1.195e+01 | 0.0005 | 91.0 | 15.40% | 3580.0 | 9.64% | motif file (matrix) |
svg |
| 6 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-5 | -1.184e+01 | 0.0005 | 33.0 | 5.58% | 876.1 | 2.36% | motif file (matrix) |
svg |
| 7 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-4 | -1.064e+01 | 0.0012 | 52.0 | 8.80% | 1775.9 | 4.78% | motif file (matrix) |
svg |
| 8 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.790e+00 | 0.0025 | 58.0 | 9.81% | 2123.2 | 5.72% | motif file (matrix) |
svg |
| 9 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-4 | -9.720e+00 | 0.0025 | 63.0 | 10.66% | 2373.1 | 6.39% | motif file (matrix) |
svg |
| 10 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-3 | -9.194e+00 | 0.0037 | 52.0 | 8.80% | 1880.9 | 5.07% | motif file (matrix) |
svg |
| 11 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-3 | -9.061e+00 | 0.0038 | 48.0 | 8.12% | 1699.2 | 4.58% | motif file (matrix) |
svg |
| 12 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-3 | -8.804e+00 | 0.0046 | 50.0 | 8.46% | 1814.9 | 4.89% | motif file (matrix) |
svg |
| 13 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.962e+00 | 0.1959 | 11.0 | 1.86% | 286.6 | 0.77% | motif file (matrix) |
svg |
