Information for 15-GTCACATGAA (Motif 48)

A T C G C A G T T A G C C T G A A G T C C G T A A C G T C T A G C G T A T G C A
Reverse Opposite:
A C G T C G A T A G T C G T C A G C A T T C A G A G C T A T C G G T C A A T G C
p-value:1e-3
log p-value:-8.057e+00
Information Content per bp:1.715
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.54%
Number of Background Sequences with motif327.5
Percentage of Background Sequences with motif0.88%
Average Position of motif in Targets52.7 +/- 25.5bp
Average Position of motif in Background46.0 +/- 44.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GTCACATGAA
GTCACATGAY
 A T C G C A G T T A G C C T G A A G T C C G T A A C G T C T A G C G T A T G C A
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

USF2/MA0526.1/Jaspar

Match Rank:2
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-GTCACATGAA
GGTCACATGAC
 A C G T A T C G C A G T T A G C C T G A A G T C C G T A A C G T C T A G C G T A T G C A
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

E-box(bHLH)/Promoter/Homer

Match Rank:3
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---GTCACATGAA
CCGGTCACGTGA-
 A C G T A C G T A C G T A T C G C A G T T A G C C T G A A G T C C G T A A C G T C T A G C G T A T G C A
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A A C G T

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:4
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GTCACATGAA--
GTCACGTGACYV
 A T C G C A G T T A G C C T G A A G T C C G T A A C G T C T A G C G T A T G C A A C G T A C G T
T C A G A G C T A T G C C G T A A G T C T C A G A C G T A T C G T C G A A G T C G A T C T G A C

USF1/MA0093.2/Jaspar

Match Rank:5
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GTCACATGAA
GGTCACGTGGC
 A C G T A T C G C A G T T A G C C T G A A G T C C G T A A C G T C T A G C G T A T G C A
C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

TFEC/MA0871.1/Jaspar

Match Rank:6
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GTCACATGAA
ATCACGTGAC
 A T C G C A G T T A G C C T G A A G T C C G T A A C G T C T A G C G T A T G C A
T C G A C A G T G T A C C G T A A G T C T C A G G A C T A C T G T C G A A G T C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GTCACATGAA--
GWAAYHTGABMC
 A T C G C A G T T A G C C T G A A G T C C G T A A C G T C T A G C G T A T G C A A C G T A C G T
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GTCACATGAA
GGTCACGTGA-
 A C G T A T C G C A G T T A G C C T G A A G T C C G T A A C G T C T A G C G T A T G C A
T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A A C G T

BHLHE41/MA0636.1/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GTCACATGAA
GTCACGTGAC
 A T C G C A G T T A G C C T G A A G T C C G T A A C G T C T A G C G T A T G C A
T C A G C A G T A G T C C G T A A G T C C T A G A G C T A T C G G T C A A G T C

TFEB/MA0692.1/Jaspar

Match Rank:10
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GTCACATGAA
ATCACGTGAC
 A T C G C A G T T A G C C T G A A G T C C G T A A C G T C T A G C G T A T G C A
T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C