Information for 20-CTGCAGTTCATGA (Motif 43)

A G T C A C G T A C T G A G T C C G T A A T C G A C G T A G C T A G T C T G C A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C G T A C T G T C G A C G T A A T G C A C G T A C T G A G T C C G T A A C T G
p-value:1e-6
log p-value:-1.426e+01
Information Content per bp:1.930
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.2 +/- 9.9bp
Average Position of motif in Background60.8 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTGCAGTTCATGA
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A T C G A C G T A G C T A G T C T G C A A C G T A C T G C G T A
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTGCAGTTCATGA--------
-TGCAGTTCCNNNNNTGGCCA
 A G T C A C G T A C T G A G T C C G T A A T C G A C G T A G C T A G T C T G C A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T A C G G A T C G C T A T C A G G A C T C G A T G T A C G A T C G T C A T C G A T G A C C G T A C T A G G A C T C T A G C T A G G T A C A G T C C G T A

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:3
Score:0.54
Offset:8
Orientation:forward strand
Alignment:CTGCAGTTCATGA-
--------CATGAC
 A G T C A C G T A C T G A G T C C G T A A T C G A C G T A G C T A G T C T G C A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C

PB0150.1_Mybl1_2/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CTGCAGTTCATGA
CACGGCAGTTGGTNN
 A C G T A C G T A G T C A C G T A C T G A G T C C G T A A T C G A C G T A G C T A G T C T G C A A C G T A C T G C G T A
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

PH0073.1_Hoxc9/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTGCAGTTCATGA-----
--NNAATTAATGACCNNN
 A G T C A C G T A C T G A G T C C G T A A T C G A C G T A G C T A G T C T G C A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

Hmx1/MA0896.1/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CTGCAGTTCATGA--
ACAAGCAATTAATGAAT
 A C G T A C G T A G T C A C G T A C T G A G T C C G T A A T C G A C G T A G C T A G T C T G C A A C G T A C T G C G T A A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CTGCAGTTCATGA--
ACAAGCAATTAATGAAT
 A C G T A C G T A G T C A C G T A C T G A G T C C G T A A T C G A C G T A G C T A G T C T G C A A C G T A C T G C G T A A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CTGCAGTTCATGA
---CACTTCCTGT
 A G T C A C G T A C T G A G T C C G T A A T C G A C G T A G C T A G T C T G C A A C G T A C T G C G T A
A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CTGCAGTTCATGA
---CACTTCCTGT
 A G T C A C G T A C T G A G T C C G T A A T C G A C G T A G C T A G T C T G C A A C G T A C T G C G T A
A C G T A C G T A C G T A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CTGCAGTTCATGA-
----ATTTCCTGTN
 A G T C A C G T A C T G A G T C C G T A A T C G A C G T A G C T A G T C T G C A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G